Strain | Pseudomonas aeruginosa strain AZPAE14395 AZPAE14395_contig_5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCCAGCAAGATCGACTCGCGCACCATCCTCGACCAGGGTGGCGCCGAACAACTGCTCGGCCACGGCGACATGCTCTACCTGCCGCCGGGCACAGGCCTG CCGATTCGCGTGCACGGCGCCTTCGTTTCCGACGACGAGGTGCACCGGGTGGTCGAGGCCTGGAAGCTGCGCGGCGCGCCCGACTACATCGAGGACATCC TCGCTGGCGTCGACGAAGGCGGCGGCGGTGGCGGTTCCTTCGATGGCGGCGACGGCTCCGGCGAAGGCAGCGAGGACGACCCGCTCTACGACGAGGCGGT ACGTTTCGTCACCGAGAGTCGCCGGGCATCGATCTCCGCCGTGCAACGCAAGCTGAAGATCGGCTACAACCGCGCCGCGCGGATGATCGAGGCGATGGAG ATGGCCGGCGTGGTCACCCCGATGAATACCAACGGCTCCCGCGAAGTCATCGCGCCGGCGCCGGTTCGTGATTGAACCCGACAGGTTTTAGAGGATTCCG
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DNA Sequence for Gene |
>NQ58_RS06910
ATGCGACTGATCCGCACGTTGTTCGTTGCCGCCCTGGCCATGGGCGCTTCGCTGGCCCATGCCGACGACAGCGCCGCCGTCCAGCGCCTGACCGGCCTGC TGAACAAGGCCCAGACCCTGACCGCGCGTTTTTCCCAGCTGACCCTGGACGGTAGCGGCACGCGCCTGCAGGAAACCGCCGGCCAACTGAGCCTGAAGCG GCCGGGACTGTTCCGCTGGCATACCGATGCGCCGAACGAGCAATTGCTCATTTCCAACGGCGAGAAGGTCTGGCTGTACGACCCGGACCTGGAACAGGTG ACCATCCAGAAGCTCGACCAGCGCCTGACCCAGACGCCGGCGCTGCTGCTCTCCGGCGACATCTCGAAGATCAGCGAAAGCTTCGCCATCACCTACAAGG AAGGCGGCAACGTAGTCGATTTCGTACTCAAGCCGAAGACCAAGGACACCCTCTTCGACACCTTGCGCCTGTCGTTCCGCAGCGGCAAGGTGAACGACAT GCAGATGATCGATGGCGTCGGCCAGCGCACCAACATCCTGTTCTTCGACGTGAAGATGAACGAGGCGCTGGATGCCAAGCAATTCACCTTCGACGTTCCG CCGGGCGTCGACGTGATCCAGGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCAAGCCGTGGATCTGTTCCGCAGCGAGCCCGTCGCGCAGCCCCTGGCGGCACGGCTGAGGCCCGCAAACCTGGACGAGTACGTGGGGCAGGAACACC TGCTGGCCCGCGGCAAGCCCTTGCGCGAGGCGCTGGAGCAGGGCGCGCTGCACTCGATGATCTTCTGGGGCCCGCCGGGAGTCGGCAAGACCACCCTGGC GCGGCTGCTGGCGCAGGTGTCGGACGCCCATTTCGAGACCATTTCCGCGGTGCTGTCCGGGGTCAAGGAGATCCGCCAGGCGGTCGAGGTGGCCAAGCAG CACGCGGCGCAATACGGGCGCCGGACCATCCTGTTCGTCGATGAGGTGCACCGCTTCAACAAGAGCCAGCAGGATGCCTTCCTGCCCTATGTGGAAGACG GCACGCTGATCTTCATTGGCGCGACCACCGAGAACCCGTCCTTCGAGTTGAACAATGCGCTGCTTTCGCGGGCTCGCGTGTATGTCCTCAAGAGCCTCGA
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Amino Acid Sequence |
>membrane protein
MRLIRTLFVAALAMGASLAHADDSAAVQRLTGLLNKAQTLTARFSQLTLDGSGTRLQETAGQLSLKRPGLFRWHTDAPNEQLLISNGEKVWLYDPDLEQV TIQKLDQRLTQTPALLLSGDISKISESFAITYKEGGNVVDFVLKPKTKDTLFDTLRLSFRSGKVNDMQMIDGVGQRTNILFFDVKMNEALDAKQFTFDVP PGVDVIQE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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