Pseudomonas aeruginosa AZPAE14395, NQ58_RS28945

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF69349 Phage fibre proteins - - 442 493 1.26E-9
MobiDBLite mobidb-lite consensus disorder prediction - - 263 291 -
Pfam PF05954 Phage tail baseplate hub (GPD) - - 27 327 9.1E-76
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 364 451 2.3E-33
SUPERFAMILY SSF69279 Phage tail proteins - - 9 182 1.28E-47
Gene3D G3DSA:2.30.110.50 - - - 21 328 7.7E-79
Gene3D G3DSA:4.10.220.110 - - - 221 284 7.7E-79
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 358 456 1.7E-39
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 19 502 8.2E-120
Pfam PF13296 Putative type VI secretion system Rhs element Vgr IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain 475 581 2.1E-34
PANTHER PTHR32305 - - - 3 724 0.0
Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IPR018769 Type VI secretion system spike protein VgrG2, domain of unknown function DUF2345 615 752 4.1E-46
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 377 453 3.2E-14
SUPERFAMILY SSF69279 Phage tail proteins - - 197 365 7.99E-32
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 9 493 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 274 289 -
Gene3D G3DSA:3.55.50.10 - - - 96 187 7.7E-79

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.