Strain | Pseudomonas aeruginosa strain AZPAE14395 AZPAE14395_contig_3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CACGTCGGGATCTATATCGGCGGCGTGTTGCTGGCGCTCGGCCTGTTCCCCTGGATCGGCGCGATCCTCCAGCAGATCCCCAAGCCGGTGCTCGGCGGCG CCACCCTGGTGATGTTCGGCAGCGTCGCCGCCGCCGGCATCCGCATTCTCGGCCAGACCGCGATGGACCGCCGCAGCGTGCTGATCATCGCCGCCTCGTT CGGCGTCGGCCTCGGCGTGGCCGCGCAGCCGACTCTGCTCGACCAGATGCCGGCGGTAGTGAAGACCCTGTTCGACTCGGCGATCACCAGCGGCGGCATC ACCGCCATCCTGCTCAATCTGCTGCTGCCCGAGGAGCGCGTTGCCGAAGCGGCGCAGGCCAGCGCGAAGGGCGGCGCCCTGGCGCGCTGGCGCAAGCCGC TGGGTTGATACGGGCGTTTGCAAATTTTTCCGCGCCTGGCTTGTGTCCCGCGGCCGGGCTGGGGTATCAACGCGGGGATCACGCCGATGGAAACCTGCGC
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DNA Sequence for Gene |
>NQ58_RS03235
ATGACCCTGACAGTGCCCGCCCACGACCCGGCCGCCCGCGACAAGCCGGCCGGGCGCATCCGCCAGAAGAACGAGGAGGCGATCATCGCCGCGGCCGAGG AGGAGTTCGCCCGCCACGGCTTCAAGGGCACCAGCATGAACACCATCGCGCAGAACGTCGGCCTGCCCAAGGCCAACCTGCACTACTACTTCGGCAACAA GCTGGGCCTCTACACGGCGGTGCTGAGCAACATCCTCGAACTCTGGGACAGTACCTTCAACACCCTCGGCGTCGACGACGATCCGGCCGAGGCGCTGGCC CGCTACATCCGCGCCAAGATGGAGTTCTCCCGCCGCTACCCGCTGGCCTCGCGGATCTTCGCCATGGAGATCATCAGCGGCGGAGAGTGCCTCACCGCGC ATTTCAACCAGGACTACCGCAGCTGGTTCCGCGGCCGCGCCGCGGTATTCGAGGCCTGGATCGCCGCCGGCCGGATGGACCCGGTGGATCCCGTGCACCT GATCTTCCTGCTCTGGGGCAGCACCCAGCACTACGCCGACTTCGCCAGCCAGATCGGCCTGGTCACCGGCCGCAAGCGCATGTCCAGGCAGGACTTCGCC GCCGCCGCCGACAACCTGGTGCGGATCATCCTCAAGGGCTGCGGACTGACCCCGCCGGCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGCGATGCCGAGCACCCTGCAAGGCCTCGCCGAATACCGCGAGGAAATCCGCAAGAGCCGCTTCCACACCATCGCCGCGCCGGTGGCCGACGAGGACGA GGCGCAGGCGTTCATCGCCGCCCACCGCGACGCTTCCGCCGGACACAACTGCTGGGCCTGGAAGTGCGGCGCGCAGTACCGCTTCAGCGACGACGGCGAA CCCGGCGGCAGCGCCGGGCGGCCGATCCTGGCGGCCATCGAGGGACAGGACATGGACTGCGTGGCGGTGCTGGTCAGCCGCTGGTTCGGTGGCATCAAGC TCGGCACCGGCGGCCTCGCCCGCGCCTATGGCGGCGGCGCGGCCAAGTGCCTGCAGCAGGCGCCGCGCAGCGAGCTGGTCGAGCGCTGCCGGGTGCGCTT CGCCTGTGCCTTCGCCGACCACGCGCTGCTCAAGGCGCGCAGCCTGGCGCTGGGCGCCAGCGTGGCGGCGGAAGACTACGGCGCCGACGGCGTCGTCCTG
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Amino Acid Sequence |
>TetR family transcriptional regulator
MTLTVPAHDPAARDKPAGRIRQKNEEAIIAAAEEEFARHGFKGTSMNTIAQNVGLPKANLHYYFGNKLGLYTAVLSNILELWDSTFNTLGVDDDPAEALA RYIRAKMEFSRRYPLASRIFAMEIISGGECLTAHFNQDYRSWFRGRAAVFEAWIAAGRMDPVDPVHLIFLLWGSTQHYADFASQIGLVTGRKRMSRQDFA AAADNLVRIILKGCGLTPPAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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