Strain | Pseudomonas aeruginosa strain AZPAE14395 AZPAE14395_contig_17, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGGTCGGCTACGCGGCGGTGATGCTGGCGATGATCGGCGCCTTCGTCGTCGCCCTGGATGCCCGCCCGCTGGCCTCGCTGGACGTGACCCGCGACCGT GGGCTGTTCCGCGAGAACGCCGCCGGGCAGATCGAGAACATCTACACCCTCAAGGTCATCAACAAGACCCAGCAGCCGCAGCGCTATCGCCTGCAACTCG ACGACGCACCGGAGTTCCGCCTGCAGGGCGAGCACACCCTGAGCCTGAAGCCCGGCGAGATCCTCGACTTCCCGGTGTCGGTGGCCTCTACCGCCGAACG CGCCAGGGCCGGCTCGCAACCGCTGGCGTTCAGCCTGCGCGGCATCGACGACCCGAGCCTGGCGGTCGGCAGCACCAGCACCTTCGTTTCGCCGGCGCGC TGAGGAGGCCGCGATGAGGCATGACAACACGGTCCCGGCGCGCATAGAGTGGGCGCCAGCGGCCGTGCCCACGGCCAGCCAGGACAGCGGCCAGGACAAG
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DNA Sequence for Gene |
>NQ58_RS20670
ATGAAGCGCTACGAGAAATTCGCCGACGAGATTGCCGAGCTGATCCGCACCGGCGTCCTCGCCCCCGGGCAGAAGGTGCCCTCGGTACGGCACGCCAGCC GTACCTACGGGGTCAGCGCTTCCACCGTGTTCCAGGCCTACTACCTGCTGGAAAGCCGTGGGCTGATCATGGCCCGCGCACGCTCCGGCTACTTCGTCTG CCAGCACGTGCAGCGGCCGCTGCCGGAACCGGAGATCAGCCCGCGCCAGGCCGACGCCACCGAGGTCGACGTCAGCGAGCTGGTGTTCTCCGTACTCAGT TCGATCAAAGACCCGGACACCGTGCCCTTCGGCTCGGCGTTCCCCAGCCCGCAACTGTTTCCCCTGCCGCGCCTGGCGCGCTCGATGGCCCATGCGGTGC GCGACATGGATCCGCAGTCGGTGGTCGCCGACATGACGCCGGGCAACCATGGCCTGCGCCGGCAGATCGCCCTGCGCTACATGGTCGGCGGCCTGCTGCT GCCGGTGGAAGAACTGGTCATCAGCAACGGCGCGCTGGAGGCACTCAACCTCTGCCTACAGGTGGTCACCCGTCCCGGCGACCTGGTGGCCATCGAGGCG CCGGCGTTCTACGCCACCCTGCAGGTGCTGGAACGGTTGAAGCTGAAGGCGGTGGAAATCCCCGTGCATCCGCGCGAAGGCATCGACCTGGAAGTGCTCG CCGACAGCCTGGAGCGCCTGCCGATCAAGGCTTGCTGGTTCATGAGCAACTTCCAGAACCCGATGGGCGCGAGCATGGACGACGAGAAGAAACGCGCCCT CGCCGAGCTGCTGGCGCGCCACCAGGTGCCGATGATCGAGGATGACGTGTACGCCGAGCTGTACTTCGGCCAGCAGGCGCCGAAACCGGTCAAGGCCTAC GACCAGGAAGGCCTGGTGATGCACTGCAGTTCCTTCTCCAAGAGCCTGGCGCCGGGCTACCGGGTCGGCTGGGTGGCCGGCGGACGCTACGCCGAGCAGA TCGAGCGACTGAAGCTGATGACCAGCCTGTCGGCGTCGATCCCGGCCCAGGCGGCCATCGCCGACTATCTCCAGCACGGCGGCTACGACCGCCACCTGCG CAAGCTGCGCTACGCCCTGGAGACCCAGCAGAACGCCATGCTCGCGGCGGTGGCGCGTTACTTCCCCGAGCAGACCCGGGTCAGCCGTCCCAGCGGCGGC TACTTCCTCTGGCTGGAGTTGCCCGAGGCGGTCGACTCGCTGCGCCTGTTCCAACTGGCCCTGGCCCAGGGCATCAGCCTCGCCCCGGGGCCGATCTTCT CCGCCACCCGCCGCTTCGCCCATTGCGCCCGGCTCAACTACGGGCACCCGTGGAGCGCGCGGCAGGAGAAGGCGATGGAGACCCTCGGGCGGATCGCCCA GTCGCTGGCGGGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCCCGCACACGGAAAGCCACTCCGGAGTAGGGCGGATAACCGCGCGCGGTCATCCGCCATGATCGGCTCGCGTCCCCCATCCCGGTATGCGCCGCCGC CCTGCGCGAACGCCTTCCCCTGCCCCATCTGATACCCAAATTCCATATCGACCTGAAGCTGTTTTACCCCCGCCCCAGCCCTTAGATTGCAGGCTCCGGC TGGCGCCCCGTCTCCCCCCTCGACGGCGGTCGCCGGCTGTTCATTTCTTTCGGGACTGTACAGATGAACAAAGCAACGACGGAACCTGCCTACAACTACA AGGTGGTTCGCCAGTTCGCCATCATGACCGTGGTATGGGGCGTGATCGGCATGGGGTTGGGCGTACTGATCGCCTCGCAACTGGTCTGGCCCCAGATGAA CTTCGACCTGCCCTGGACCAGCTTCGGCCGCCTGCGGCCGCTGCATACCAACCTGGTGATCTTCGCCTTCGGCGGCTGCGCGCTGTTCGCCACCAGCTAC
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Amino Acid Sequence |
>GntR family transcriptional regulator
MKRYEKFADEIAELIRTGVLAPGQKVPSVRHASRTYGVSASTVFQAYYLLESRGLIMARARSGYFVCQHVQRPLPEPEISPRQADATEVDVSELVFSVLS SIKDPDTVPFGSAFPSPQLFPLPRLARSMAHAVRDMDPQSVVADMTPGNHGLRRQIALRYMVGGLLLPVEELVISNGALEALNLCLQVVTRPGDLVAIEA PAFYATLQVLERLKLKAVEIPVHPREGIDLEVLADSLERLPIKACWFMSNFQNPMGASMDDEKKRALAELLARHQVPMIEDDVYAELYFGQQAPKPVKAY DQEGLVMHCSSFSKSLAPGYRVGWVAGGRYAEQIERLKLMTSLSASIPAQAAIADYLQHGGYDRHLRKLRYALETQQNAMLAAVARYFPEQTRVSRPSGG YFLWLELPEAVDSLRLFQLALAQGISLAPGPIFSATRRFAHCARLNYGHPWSARQEKAMETLGRIAQSLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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