Pseudomonas aeruginosa AZPAE14395, NQ58_RS17480

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14395 AZPAE14395_contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCCAACGTGGTGGCCGATCCGCCGAAGAAGCCGGACAGCAAGTACGGCAGCCGCCCCATCTGATTTCGCGTCATCCCAAGGCCCGCCACCCGTGAGGGA GTGGCGGGCCTTGTGCTATGGCGCCTGCTATCTTGGCGGGCATCCCGCCCCGCCGCATCCCGGTTGGCGAGCCGATCTTTCGCCTGTTCAGGCACGGCTG GCGACGGGCCAAGGCCTTTTCCTTTCCGGTGGCAGCGCTACCGTTCCACATCGTCAACCGAAGCTGCTTGCCATCCAGGCGCTCCAAGCGGCGTCCGGGG CCGATCCTGCACTTGCCGGAGAGCGAGCTGTAGAGCTTGCTTAAGAATTTTCCTAGCGATTCTTAGGTGGATTCGCGGAGCCGTGTAGGTCCTGTCTTAT GGCTCTTTTCCAGGCGTTCTGAAAAGATTCGCCACCCATCAAGTTCGCGCCGGTTCCGCCGGATTTTCCCGGACATGCCGGACACATCGGTTGTCATCCC
DNA Sequence for Gene
>NQ58_RS17480
ATGGAGTTCAAGACGTTCCGTCGAACCCTGCTGATCGCGGCAGTCCTGTTCGTTCCCGCCGGCACCAGCATGGCTGCCAATCTGTACGCTTTCGGCGGCC GCGATATCGCCGTCCCCTCGATCCTTCCCGAGGGAAACGTCACGTCGCGCTACACGTTCACTCCCATGCAACTGTGCGGCAAGCCCAGCTGCGATCTCAT CGGCGTCTCTCTGTACAACAAGGGAAGTGTCTGGGACCCGGTCGATGGTCCGGACCTGAATACCAACGTGCCGGGCCTTTCGGTGCGCCTGCTGCTGGAT GGCATACCGGCGAGCAGCCGTTTCAAGGGCACTTTCTCGCAAATCGCGGAGGTCCAGTTGTTCCGCAACTCGACGCCGCTCTCCGACGGCCAGTTCGCGA GCGGAGCGTTCAACTCGTACTTCCTCATTACCTACAAGGACGGGCTTGTCGCGTCTGGCACCTCTTCCGTCAGGTTGACCGGGAGCGTCACCACGATCAA TGCGACCTGCCAGGTCGCCGACCAGACCGTGAAGCTGCAGTCGATCGCTGCCGCCCGGCTGAACGGCGTCGGCACCTACGCGGCCGTTACCCCGTTCAAT CTCGTAGTGGCCGGCTGTCCTCGCGGGTACAACCGCGTCGGCTACAGCCTTCAAGCGGTGGGGGGGGCGGTGGCCGAAGGCTCGGGTGTGCTGCCGCGCC TGGCGGGCAGCACCGCGACCGGCGTATCGATCCGGGTCACCGACGAGGCCGGCGTGCCGCTACGGATGGGACTCTCGTTGCCGGTGACCGCGTACGACAA GAACACCGGCGGGGCGTACTGGATCCCGATGAAAGCGTCCTATGTGCAGACCGCCGAGAAAATCACGCCCGGCTCGGTCCTGGCCGCGATGGTGATCCTG CTCGACTACCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCAGGGGAGGGCAAGAGCGCGCCTCACCCGAACGCCTCGAAGAACGCCAGGGCCCGCGGGTCGCTGGCATAGGCGATGTTGATACGCAGCCAGTCGCTC TCCTCGCCTTCCGGGCTGAAGCCGCTGCCCGGCGACAGCAGCACGTCCAGGCGTGTCGCCACGGCCTGCAATTCGGCGAACGGGTAGTCGCCGATACGGG CCCAGACGAACATCCCGCCGACCGGTTCGGCGAACACCTCCCAGCCGTTGTCCCCAAGCACCCGCAGGGTCGCCGCCATCTGCCGGGTCAGGCGCTGGCG CAGGCGTTGCACCAGCTTGCGGTAACTGCCGTTGGCGAGCATGGTCGAGACCACGCATTCGGCGAAGCGCTGGCTGCCGATGCTGGTGTACATCTTCACA TCCGCCAGGCGCCGGATCAGCTCGGGGCCGGCGATCAGGTAGCCGACCCGTAGCGAGCAACTGAGGGTCTTCGAAAAGCTCGCCAGGTAGATCACCCGGC
Amino Acid Sequence
>fimbrial protein
MEFKTFRRTLLIAAVLFVPAGTSMAANLYAFGGRDIAVPSILPEGNVTSRYTFTPMQLCGKPSCDLIGVSLYNKGSVWDPVDGPDLNTNVPGLSVRLLLD GIPASSRFKGTFSQIAEVQLFRNSTPLSDGQFASGAFNSYFLITYKDGLVASGTSSVRLTGSVTTINATCQVADQTVKLQSIAAARLNGVGTYAAVTPFN LVVAGCPRGYNRVGYSLQAVGGAVAEGSGVLPRLAGSTATGVSIRVTDEAGVPLRMGLSLPVTAYDKNTGGAYWIPMKASYVQTAEKITPGSVLAAMVIL LDYQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site