Strain | Pseudomonas aeruginosa strain AZPAE14395 AZPAE14395_contig_10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACGCGGTACGCCTGGAACATCGCGTCGCCGGCGCCGACGCCAACCCCTACCTGCTGCTGGCCTCGGTGCTGGCCGGGGTGCACCACGGGCTGACCAACA AGGTCGAGCCGGGTGCCCCGATCGAAGGCAACTCCTACGAGCAGCTGGAGCCGAGCCTGCCGAACAACCTGCGCGACGCCCTGCGCGAACTGGACGACAG CGAGATCCTGGCGAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCCTGCAAGGAAAGCGAGCTGGAGGAGTTCGAGTACTCGATCTCCGACCTC GAGTACAACTGGTACCTGCACACCGTGTGAGCATGGGCGGGCGGCTCCGGTCCGGCGCCGCCCGCCCGTTCTTCCGTCGAGGTTCCCACCCTTGCTGATG GTAGACGGCGGCAAGCCTGCGGTTTCCGCCCGTCCGCCTTCCTTTGCTGTGCATTAGAAAAAGAAGAAATCGAGGCAAGCATACCC
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DNA Sequence for Gene |
>NQ58_RS16185
ATGTCGAATCCTCCCCCCACCGCAGAACGAACCCAGCTTCGCAAGTCCCTCAAGCTGTGGCAGATCGTCATGATCGGGTTGGCCTACCTGACCCCGATGA CCGTCTTCGACACCTTCGGCATCGTTTCCGGGATTTCCCAGGGACACGTGCCTACCGCCTACCTGCTGGCCCTCGCCGGCGTGCTGTTCACCGCGATCAG CTACGGCAAACTGGTCCGCCAGTTCCCCACCGCAGGCTCGGCCTATACCTACGCGCAACGGGCGATCAATCCCCATGTCGGCTTCATGGTCGGCTGGTCG TCGCTGCTGGACTACCTGTTCCTGCCGATGATCAACGCGCTGCTGGCGAAGATCTACCTGACCGCACTGTTCCCCGAGGTCGCGCCATGGGTCTGGGTGG TGATGTTCGTGCTGATCATGACCCTCATCAACATCAAGAGCGTGAACCTGGTCGCCAATTTCAACACCGTCTTCGTGCTGGTCCAGCTGGCGATCATCGT GGTCTTCATCGGCCTGGTGATCCATGGCCTGAACAACGGGGAGGGGACCGCCACGGTGCTCAGCACCCAGCCGTTCTTCTCCGAGCACGCGCATCTCTCG GCGATGGTGGCGGGGGCGACGATCCTCTGCTTTTCCTTCCTCGGTTTCGACGCGGTGACCACGCTGTCCGAGGAAACCCGCGACGCCGCCAAGGTGATCC CGCGAGCGATCTTCCTCACCGCGCTGTACGGCGGGGTGATCTTCATCACCGTGTCGTATTTCCTGCAGTCCTATTTCCCGACCAACGTACGCTTCAAGGA ACCCGACGCGGCGTTGCCGGAAATCGCCCTGTACGTCGGCGGTAAGCTGTTCCAGTCGATCTTCCTCTGCGCCACCTTCATCAATACCCTGGCGTCTGGC CTGGCCTCCCAGGCCAGCGTGTCGCGCCTGCTGTACGTGATGGGGCGGGACAACGTGCTGCCGGAGCGGATCTTCGGCTTCGTCCATCCGAAATGGCGCA CGCCGTCGATCAACGTGCTGATCGTGGGCATGGTGGCGCTTTCGGCGATCTCCTTCGACCTGGTGACGGCGACCGCGCTGATCAATTTCGGCGCCCTGGT GGCCTTCACCTTCGTCAATCTCTCGGTGATCGTGCATTTCTATGTGCGCGGCGGGCGCAACCGCAGCCTCAAGGAGCATTTCCACTACCTGGTCCTGCCG CTGCTCGGCGCGGCCATCGTCGCGGTGCTCTGGCTCAACCTGGAAAGCACCTCGCTGGTGATGGGGCTGATCTGGGCCGGGCTGGGCTTCGGCTACCTGT TCTACCTGACCCGCAGCTTCAGCCGTCCGCCGCCGCGCTTCCAGGAGAGCGAACTGAGCCCGACCCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGAGCGGTGAATGGATTCAGCGAAAAAGTGAAGGAAAAAGTTTGGTAATCTTCACGAAATTTTCACGGTGACGGGTCAATCATGGACCCATGGCTAAC GGACTAGCCCCCCATCTGAAGCCCGCCTCACGGCGGGCTTTGGCTATCTGCAGACAGCGAATTCCGCGTTTTCCCTCCTTTTCACAGGGGTTTCCGGCCT CCCGGCTGGCAATGCACCTGCGACGACATGTCCGAATCCAGACAGAATTGGACGCCCCCAAAAAGCGCAGACACGGCTAGAATCCACGCCGTCCCGATCC GGTTCGATGGCCGTGGCGGGGGAGCCCGGTATCCGCTGGTCGGTGTTTCCTGTGGTGCTGCGCGTCCTTCCCTAGACTACCCGGCTCGCTCGAACCATCC CTTCGCGGGGGCGGAACGGCACAGGGTCGTTCGGCATGGAAGCTGCCTGGGCCGGCCTTCGACACACCTATAAGAGTAGAAATCTGCATGACATACCCTG
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Amino Acid Sequence |
>putative lysine-specific permease
MSNPPPTAERTQLRKSLKLWQIVMIGLAYLTPMTVFDTFGIVSGISQGHVPTAYLLALAGVLFTAISYGKLVRQFPTAGSAYTYAQRAINPHVGFMVGWS SLLDYLFLPMINALLAKIYLTALFPEVAPWVWVVMFVLIMTLINIKSVNLVANFNTVFVLVQLAIIVVFIGLVIHGLNNGEGTATVLSTQPFFSEHAHLS AMVAGATILCFSFLGFDAVTTLSEETRDAAKVIPRAIFLTALYGGVIFITVSYFLQSYFPTNVRFKEPDAALPEIALYVGGKLFQSIFLCATFINTLASG LASQASVSRLLYVMGRDNVLPERIFGFVHPKWRTPSINVLIVGMVALSAISFDLVTATALINFGALVAFTFVNLSVIVHFYVRGGRNRSLKEHFHYLVLP LLGAAIVAVLWLNLESTSLVMGLIWAGLGFGYLFYLTRSFSRPPPRFQESELSPTQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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