Pseudomonas aeruginosa AZPAE14402, NQ60_RS12405

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14402 AZPAE14402_contig_8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACGTCATCGCCCGCGACGAGAGCGGCTTCAAGGGGCCGGCATTGTTGCAGAACATCCTCGAGAGCGGCCTGCGCTTCGGCGACATGGACATCTTCCATCG CCACGAAAGCATGGCCGGCAATGGCGAGATCCTGTTCTCCATGGCCAATGCGGTGAAACCGGGCACTTTCGACCTGGACGACATCGACAACTTCAGCACC CGCGCCGTGAGCTTCTTCCTCGGCCTGCCGGGGCCGCGCCATCCGAAGCAGGCCTTCGACGTGATGGTTGCCGCCGCGCGCAAGCTGGCCCACGAGCTGA ACGGCGAGCTGAAGGACGAGCAGCGCAGCGTGTTGACCGCCCAGACCATCGAGCACTACCGCCAGCGCATCATCGACCATGAGCGTCGCAGCCTGATGCA GAAGCGCTGATCCGGCCACAGCCCCTTTCTTCGTACGGGAGGGGGCGAACTACTCTATAGAGCAGCCGAGGCTGCTCTTTTCGTTTCACGGACTCCCACC
DNA Sequence for Gene
>NQ60_RS12405
ATGACCGACACCCAGGCTGCCGCCGAACGCATCGCGCAACTGCGAACCGAACTGGACACCCACAATTACCGTTACTACGTGCTCGACGAACCGAGCATTC CCGACGCCGAATACGATCGCCTGTTCCGCGAGTTGCAGGCGCTGGAGGCCGAGTACCCGCAACTGCTGACGCCCGACTCGCCGACCCAGCGGGTCAGCGG CACGCCGGCCTCGGCGTTCGGCGAAGTGCGCCATGAGATCCCCATGCTCAGCCTCGGCAACGCCTTCGAGGAGCAGGACCTGCTGGACTTCGACCGCCGC GTACGCGAAGGACTGGCCGACCTGTTGCCTGGCGGCGACCTGCTCGGCGGTGGCGCGGAGGTCGAGTACAGTTGCGAGCCGAAGCTGGACGGCCTGGCCG TCAGCCTGCTCTACGAACGTGGCCAACTGGTGCGCGGCGCCACCCGCGGCGATGGCAGCACCGGCGAGGACATCACCAGCAACGTACGCACCATTCGCAA CGTACCGCTGAAGCTGCACGGCGAAGGCTGGCCGGAGATCCTCGAAGTGCGCGGCGAGGTGTTCATGTCCAAGGCCGGTTTCGAGGCGCTCAACGCCAAG GCCGTGGAAACCGGCGGCAAGACCTTCGCCAACCCGCGCAACGCGGCGGCCGGCAGCCTGCGCCAGCTGGATTCGAAGATCACTGCCAGTCGCCCGCTGG AATTCTGTGCCTACGGCTTCGGCCAGGTCAGCGGGACGCTGCCGGACACCCAGGTGGGCATCCTCGAGGCGTTCCGCGGCTGGGGTATCCCCATCAGTCG CGAGCTGCGCCTGGTCAAGGGCGCCCAGGCCTGCCGCGACTACTACGACGACATCGGTCGCCGACGCGATGCGCTGGCCTACGAGATCGACGGCGTGGTG TTCAAGGTCAACCGCATCGCCTTCCAGCGCGAACTGGGCTTCCGCGCGCGCGAGCCGCGTTGGGCGATCGCCCACAAGTTCCCCGCGCGCGAGGAGTTGA CCGAGCTGCTGGGTGTCGAGTTCCAGGTCGGCCGCACCGGCGCCGTGACCCCGGTGGCACGCCTCAAGCCGGTGCAGGTGGCCGGCGTCACGGTGTCCAA TGCGACCCTGCACAACATGGATGAAGTCGCCCGCCTGGGCCTGCGCATCGGCGATACGGTGGTGATCCGCCGTGCTGGCGATGTGATTCCGCAGGTCATG CAGGTGGTGCTCGAGCGCCGCCCGGCGGATGCGCAGGCTATCGAGGTGCCCGAGCATTGCCCGGTCTGCGGCTCGGCCGTGGAGCGGACCCAGTTGGTCA AGCGCAGCAAGGGCAAGGAGTCGATCAGCGAGGGCGCCATCTATCGCTGCGTCGGCCGCCTCTCCTGTCAGGCGCAGTTGAAGCAGGCGATCATCCATTT CGTATCGCGCCGGGCAATGGATATCGACGGTCTTGGCGACAAGATCGTCGAGCAACTGGTGGATCGCGGGCTGGTCGCCTCGCCGGCGGATCTCTATACC CTGACCTATGAACAGGTGTTCGAGCTGGAAGGGTTCGCCGAGCTGTCCACCAACAACCTGCTGACGGCCATCGCCGATAGCCGCAAGCCTTCGCTGGCGC GCTTCATCTTCGCTCTGGGGATTCCCGACGTCGGCGAGGAAACCGCCAAGCTGCTGGCGCGTTCGCTGGGTTCGCTCGAGCGGATCGGCAAGGCGCTCCC GGAAGTGTTGACCTACCTGCCGGACGTCGGCGCCGAGGTAGCCTACGAGATCCACAACTTCTTCGCCGACGAGCACAACCGCCAGGTGATCGCCCAGTTG CGCGATGCCGAACATGGCGTGCAGTTGCAGGAAGAGGGCGAGGTCGCCGCGGAGTTCGCCGCTTGTGCCTCGCTGGCCGGTTTCATCGACAAGCTGAACA TTCCCTTCATCGCCGCCACCGGCGCGGAAAAGCTGGCCAGCCGCTTCGGTTCGCTCGACGGCATCATCCGCGCCGACTGGCTCGATCTACGCCAGGTGGA GCGTCTGCCCGAGCGAGCGGCGAAAAGCCTGCGCGATTTCTTCGACGAGCCGGCCAACGTGCAGCGTGCCCTGGCCATCGAGGCGCAGTTGCGTGAGTTC GGCATGCATTGGCAGAGCGAGCGCAAGGCGGTCGAAGGCCTGCCTCTGGCCGGGCAGACCTGGGTGCTGACCGGCACCCTGGAGGCGATGAGCCGGGACG TGGCCAAGGACAAGCTGGAAGGGCTCGGCGCCAAGGTGGCCGGCTCGGTGTCGGCCAAGACCCACTGCGTGGTCGCCGGGCCCGGCGCCGGCTCGAAGCT GGCCAAGGCCAACGAGCTGGGCGTGAAGGTGCTCGACGAAGACGGCCTGCTGAAACTGTTCGACGAGCACGGCGTCGCCCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCGGCGGCGCTGCTGCGAAAGATTTCCGAAGACTGGAGTTAACGATGGACAAGGCAAGAAAGCAGCGGTTGCTGGGCGTGCTCGCATTGGTGGTGCTGT TCGGCGCCTACGTGGGTTGGAGCGAGCGGCCGCGCATCCTGCTGCATTACAGTGGCCAGGCTTCGGCGCCGATCGCCTACAGCTACAAGGAGCAGGGCGT GGAAACCTTCTCCGGGGAGATCCGGCCCGGCCAGGTCCGCGAGTTTCCGGTGAAGCTGTTCGGCGGCAGCGATTACCGGATCGCCTTCTCCTTCCATCGC GGTGAGGAGAAGTATGCGTCGTTCAGCACCAAGCCGGGCTGGGGCACCCTGGACCTGTATGTCGATACCGAGCTGAGCGTATCGACCCAGCCGCCGCCGG AGGGTCTGATCCAGCAGCAATGAACCGCTTTCGCGAAATGGATTGCAAACGTAAGTGCTTGAAGTGGTTGTAACTTACGCGCAAGCCGGTAGAATGGCGC
Amino Acid Sequence
>NAD-dependent DNA ligase LigA
MTDTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALEAEYPQLLTPDSPTQRVSGTPASAFGEVRHEIPMLSLGNAFEEQDLLDFDRR VREGLADLLPGGDLLGGGAEVEYSCEPKLDGLAVSLLYERGQLVRGATRGDGSTGEDITSNVRTIRNVPLKLHGEGWPEILEVRGEVFMSKAGFEALNAK AVETGGKTFANPRNAAAGSLRQLDSKITASRPLEFCAYGFGQVSGTLPDTQVGILEAFRGWGIPISRELRLVKGAQACRDYYDDIGRRRDALAYEIDGVV FKVNRIAFQRELGFRAREPRWAIAHKFPAREELTELLGVEFQVGRTGAVTPVARLKPVQVAGVTVSNATLHNMDEVARLGLRIGDTVVIRRAGDVIPQVM QVVLERRPADAQAIEVPEHCPVCGSAVERTQLVKRSKGKESISEGAIYRCVGRLSCQAQLKQAIIHFVSRRAMDIDGLGDKIVEQLVDRGLVASPADLYT LTYEQVFELEGFAELSTNNLLTAIADSRKPSLARFIFALGIPDVGEETAKLLARSLGSLERIGKALPEVLTYLPDVGAEVAYEIHNFFADEHNRQVIAQL RDAEHGVQLQEEGEVAAEFAACASLAGFIDKLNIPFIAATGAEKLASRFGSLDGIIRADWLDLRQVERLPERAAKSLRDFFDEPANVQRALAIEAQLREF GMHWQSERKAVEGLPLAGQTWVLTGTLEAMSRDVAKDKLEGLGAKVAGSVSAKTHCVVAGPGAGSKLAKANELGVKVLDEDGLLKLFDEHGVAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site