Strain | Pseudomonas aeruginosa strain AZPAE14402 AZPAE14402_contig_6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGATGCAGGCGGATGGCATCCATCCGGCGCTCGCCGCCCAGCCGAGGCTCCTGGAAAATGTCTGGCCGACGCTGAAACCGCTGCTTTGAGACTTCCCCGG GAAACCGCTTTCGGCTAAGGTTGCGCACCCCTCAGGAGCCCCCCATGCCGCGTCCCGCCTGGACCCTCTATGCCTATCAACTGATCGAGCCCGACGATCA GCTGGACCTGTTCGCCTGTCGTGAGGTCCGGGTGCATGTGGTGGCGCGTCAGCTGGAGCTGGATTCCCCGGCGGACCGCACGCTTTGCGGCAAGCTGCTG CCGGCCCAGCCGCGCTGGCAGCCGCTGGAACGGGCGCGTCTGCGCGACCGGCTGCTGTGTCCCGATTGCCGGAAACAACTGGAGGCGGAAAAGCGCGGGG AGCGCCTGTCCTGGTTGGTCTGAGCCCTCCCGGTGAAACCTGGCGGGGTGTTACACTGTCTTTCCTACTCCTTCATCGCACTCGCCAAGGATTCTCCGGA
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DNA Sequence for Gene |
>NQ60_RS10020
ATGTTGTCGCGCGTACCCGTTGTCTCACTGTCTTTCGCCGCGCTGCTTTCGGCCGGCTCCGCATCGGCCCTGGAACTGCAGCTCCCGCCTCCGGGCGAGG ACGTCGTCGGCCAGGTCCAGGTGATCAAGGCCAAGTACGAGGACACTTTCGCCGACCTCGGCGAGCAGTACAACCTGGGCTACAGCGAAATGGTCGCCGC CAACCCCGGTGTCGATCCCTGGCTGCCGGGCGTCGGCACCGAGGTGATCATCCCTACCCGCTTCGTGCTGCCGCCTGGCCCGCGCGAAGGCGTGGTGATC AACCTGGCCGAATACCGCCTGTACTACTACCCGAAAGGGCAGAACGTGGTGCACACCTATCCGCTGGGCATCGGCCGCGAGGGCTGGGGTTCGCCGATCG CGAACACCCGCATCACCGCCAAGACCAAGGACCCGGCCTGGTATCCGCCGGCCTCGATCCGCGCCGAGCACGCCGCCGATGGCGATCCGCTGCCGACCGT GGTGCCGCCGGGCCCGGACAATCCGCTGGGGCCGTACAAGCTGACCCTGGGCGTGCCGGGCTACCTGATCCATGGTTCGAACAAGAAGTTCGGCATCGGC ACCCGCACCAGCCATGGCTGCTTCCGCATGTACAACGCCGACGTGACCCACCTGTTCTCTATGATCAGCGTCGGCACCAGCGTGCGTATCATCAACGAGC CCTACAAGTTCGGCGTGAGCAACGGCAAGGTCTACCTGGAGGCGCATACGCCGCTGAACGACCATGGCGACCCGTCGGTGGTGGACAAGCACACCGCGGT GATCAACACCCTGCTCAAGCGCGACGACCTGGCCAAGCGTATCCAGTTGAACTGGGATGTGGTCCGCGAAGTGGTGGCCTCGGAGGATGGCGTGCCGGTG GAAATCGCCCAGGAATCGGCGCCGGCGATGACCGCGACGGTGGATAGCGATCCTACCCAGCTTACGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGAGAGCGTCGAGGCAGAGGCCCGCGTACCCGCAAGGGACGCGGGTTTTTTCATGCCCGGCGAAACGCAGGCATAAAAAAACCGGCCCCGAGGGACCGG TTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCAGTCTGCTGAGCTTTCTGAG CAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTC TTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTAAGGTGGACATTT CCATAACAGCAATCTCCCCAGCCGGGGAAATTAGCCGGCTACATACTACCCATTACTTGTAGTAAGTAAACTGACCAAGCGCAAGCCGAGCAACTTTTTT
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Amino Acid Sequence |
>hypothetical protein
MLSRVPVVSLSFAALLSAGSASALELQLPPPGEDVVGQVQVIKAKYEDTFADLGEQYNLGYSEMVAANPGVDPWLPGVGTEVIIPTRFVLPPGPREGVVI NLAEYRLYYYPKGQNVVHTYPLGIGREGWGSPIANTRITAKTKDPAWYPPASIRAEHAADGDPLPTVVPPGPDNPLGPYKLTLGVPGYLIHGSNKKFGIG TRTSHGCFRMYNADVTHLFSMISVGTSVRIINEPYKFGVSNGKVYLEAHTPLNDHGDPSVVDKHTAVINTLLKRDDLAKRIQLNWDVVREVVASEDGVPV EIAQESAPAMTATVDSDPTQLTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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