Strain | Pseudomonas aeruginosa strain AZPAE14402 AZPAE14402_contig_40, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
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DNA Sequence for Gene |
>NQ60_RS29565
GCGCGCCGGCGACATCACCAATCTCTACGGGGATGTGTACAGCCTCGGCAGGCTGGATATCGCCCGCGACGATGCGGGGGGCTGGGCAAATCGCTTGGAG AACATTTCCGGGAATTTAGAGAGCACAGGTGATATGCGTTTCTCCGTGAGTTCACTTCTCAATAGAAGGGAAACTCTAGAGATTGAAGGTGACTTGCAGA ATAGCGCTATTGGCGTCCGCTGTACGGGGTGTCAGCTTTCTGAGAGGTGGGGAAAAACTAGGTCTTCGAGCGAGCTTGTCTGGATCAGGGAATATAAGTC TACATTGGGAGAGTCTTCTGCCGCTGCTTCAATTACGGCTGGTCGAGATCTGCTTGTTGTAGGTGCAAGCCTGCAGAATATTGCTTCTAATATAAGTGCT GTAAGAGACGCCACGCTATCTCTGAGTAATTTCGAAAACAAAGGTTATGCGTTAGGGGAATATGCGGTCAGGGGCGTTTATTCGCCGCCGAGTAAATTTG GCGAAGAATTGCTTATGCGCATATTGGCGTATAACGCTGTCAACGATCCCAGTTATGGGGAGGGATATGCGAGCACAGGGGGGAGACTTCCGAATATTCA TTATTTCGACAAGAATTTTAATGAAAAAGTCTCTCCGCTGGAGGTCATTCATGGAAACGGGAAAAATGGTGGGCCGGGTTGGCACCTGTACTTCGGTACC TTAGATGTTGAGTATCCGGACACAGATCGCTGGAATAAGGCTATTGGACGAATACCGGCGCCGAATTATTCATCGAAAAAAACGGATGCTATTCCAGATC TACTTAAGGGATTGGCTCCTCTCGATGAGTTGACGATTAACAAAGGGGCAAACTCAACGGTTGGTGCTGTCGTGCAAGCTGGCGGTCGTGTAACGGTGAA TGCTGCGGAGAGTTTCAATAATTCTGTCCTACAGGGATTTCAGGCCGTTCAGGAAACCCAGTTACCTCATCAGGACATAGCTGTTTCAAGCACGACGAGC GCCGTAGTGACTCTGAAGAGTCAACTGCCAGCGGATTTGGCAAGGCAACAGATCAATCCTCTCACCCTGCCGGGCTTCAGCCTGCCTCAAGGCCAGAATG GGCTCTTCCGCCTGGCGTCCCAAGGAGCCCAGGTGAACCAGGCAAGTGGTGCTCTGAAATCCGCCAGCGATCTCACCCAGAGCGGCCATGGCGTATCTGT ATCCGCACAGACAGGCAGTGGCGCAAGTGGCTGGAGTACCCAGGCGCGTCGTGTCGGCGATGATCGGGTCACCTCGCTTGCCGGTTCCGCCTATCAAGGC CGGGTAGCTGAGGCTATCGATGCGCTACGGGCTTCCGCGCCAATCTCGGGCGACGGGGGAAACACTGGCCGTTTCCAGGCCGGTGAGCACCAGGCGACCA CGGGACTGGGTGGACTCGTCGAGGGCAATGCATCGGGTCACAGCGGCAATGGCGTCATCCTCGCCGATCTGCGCGGTGGTCTACCCTCGTTCTCAAGCCT TCCCGCGGCTGATCGTGTTCAAGGCACAGTACCCGGTTACGATGGGAATGGAACTATTCTCGCCAATTGGCAGGGTGCGCAGGCGACGGTCCAGGCCTCG CCTTCGACAGTGCGTGTAGAGGGGGTAGTCTCCAGTCCAGGTGGCAATGGCAGCATCCTTGCCGATCTGCCGGCTGAGCAGTCGTCGGTGCAGGCACTGC CTTCGGCCGTTAGGGCTCAGGGCAGCCTGCCTCGCCTCGAAGAGCGGAGCGCCCTTCTTGCCGAGCCTCCGGTTGGGCAGCCAGCGTTGCAAACCCTGCC GTCGGTTGCGCGCGTTGAGGGCGTGCCCAGCAATGCCACACCGAGCAACAGCCACAAGTATCTGATCGAGACCAACCCGGCGCTCACCGAGCTGAAGCAG TTCCTCAACTCGGACTACCTGCTCGGTGGCCTGGGTATCAATCCGGATGACAGCAAGAAGCGCCTGGGCGACGGTCTATACGAGCAGCGCCTGGTACGCG AAGCGATCGTCCAGCGTACGGGGCAGCGCTTCATCGCCGGATTGAACAGCGACGAAGCGATGTTCCGCTATCTGATGGACAACGCCATCGCCAGCAAGGA CGTATTGGGACTGACCCCTGGCGTCACCCTCAGCGCCGCCCAGGTGGCCGCGCTGACCCACGACATCGTTTGGCTGGAAGAAGTCGAGGTGAATGGCGAG AAGGTCCTCGCCCCCGTGGTCTACCTGGCCCAGGCCGAGGGGCGGTTGGGCCCGAACGGCGCGCTGATCCAGGGGCGCGACGTGAACCTGATCACCGGCG GGGACCTGAGGAACGCCGGTACCCTGCGCGCGCAGAACGACCTCAGCGCGACAGCCGGCAACATCGACAACAGCGGCCTGATCGAGGCCGGCAACCGCCT CGACCTGCTGGCCAGCGGCTCCATCCGCAATGACCAGGGCGGCATCATTGCCGGGCGCGAGGTAAGCCTCTCCGCCCTTACCGGAGACGTCATCAATGAA CGGACGGTGACCCAGCACCAGTCTTCCTACAGGGGAACCGGTACCACTGAGGCATTTGCCGATAGCGCCGCGCGTATCGAGGCTGCGCAGAAGCTGACCG TTTCGGCAGGACGCGATGTAGCCAATATTGGCGGTGTCATCGACAGCAAGGGTGACCTCGCTTTGCAAGGCGGCAGGGATGTCCTGGTTTCGGCTGCGGT AGCGGAGCGGGGCTGGACGGCAGGAAGCCAGGCATACCAGACCCAGACGACCCAGATGGGCGCCGAGGTCGTGGCGGGACGCGACATCAGCGTCAGCGCC GGACGCGATATCAGCGTCGTGGGCAGCCGCATCGACGCTCGTCGCGACGTGACATTCGAGGCGGGTCGCGATGTGGGCCTGGTCGCGGCTGCCAACGAAG AGCATGCCTATGGCAAGACCAAGAAGGTCACTTTCCAGGACGACAAGATCACCCAGCAGGCCACTCGCGTGGACGCTGGCGGCGACCTGGCGATCAATGC CGGACAGGACCTGCGCCTGATCGCGAGCCAGGCCAGCGCCGGCGACGAAGCCTACCTGGTGGCCGGCGACAAGCTGGAGCTGCTGGCCGCCAACGACAGC AGTTACTACCTCTACGACAAGAAGAGCAAAGGCAGCTTCGGTAGCAAGAAGACCCGGCGCGACGAAATCACCGATGTGACGGCAGTGGGCAGCCAAATAT CCAGCGGCGGCGACCTCACCCTGCTCAGTGGCGGCGACCAGACTTACCAGGGCGCGAAGCTGGAATCGGGCAACGACCTGGCCATCGTCAGCGGCGGCGC GGTGACCTTCGAGGCGGTAAAGGACCTGCACCAGGAAAGCCACGAGAAGAGCAAGGGCGACCTGGCGTGGCAGTCGTCGAAGGGCAAGGGCCAGACCGAC GAAACCGTACGCCAGAGCCAGCTCGTCGCCCAGGGCAACCTGGCGATCAAGGCCGTGGAAGGCCTGAAGATCGACCTCAAGCACATCGACCAGAAGACCG TGAGCCAGACCATCGACGCGATGGTGCAGGCGGATCCGCAACTGGCCTGGCTGAAGCAGATGGAGCAGCGCGGCGATGTGGATTGGCGGCGCGTGCAGGA ACTGCATGACAGCTGGAAGTACAGCAACTCCGGGCTGGGCGTCGGCGCGCAGTTGGCGATAGCGATCGTCGTGACTTACTTCACGGCGGGCGCAGCCAGC GGGGCGATTGCAACGGCCGGGGCCGGAACCTCCATGGCAGGCGCGACCGCAGCCGCTACCGCTACGACTTCGGCGGGCTGGTTGAACGCGGCAGGTACCG CAGCGCTCAGCGGCGTGGCCAGCAATGGAGCGATCAGCACCATCAACAACCGGGGAAACCTGGGGGATGTCGTCAAGGACGTGACCTCCAGCGATGCGCT GAGGGGCTATGTAGTCGCTGGCACGACTGCGGGGCTGACTGCCGGCGTCTACGACAAATGGACCTCGACCCAGACCGGCACCTCGACCGCTCTACCGAAC ACCGGGGCCGTGGCGCCCGCCGCAGGGTTGGGCACCTGGCAAGGCGTGGGCCAGTTCACCTCGAACCAGTTGCTGCAGAATGGTACTTCGGTGCTGTTGG ACCGGGCGCTGGGCGGCAAGGGCAGCCTGGGCGATGCGTTGCAAAACAGCCTGGCAAATGCCTTTGCGGCCTACGGCTTCAAGCTGATTGGCGACACCAC CCATGGTGTGCTGGACGACGGCAGCCTCGGCAAGATCGGCTTGCACGCCCTGATGGGAGGTCTGGCCGCCGAAGCGGCCGGTGGCGATTTCCGTACCGGA GCCTTGGCTGCGGGAGTCAACGAGGCGCTGGTGGATAGCCTCGCCAAGCAATACGCCAGCCTGCCCATCGATGACAAGAAGGGCCTGCTGACCATGAGTT CGCAGTTGATCGGCATGCTGGCGGCTTCGACGCAGGGCGATGCGGACGCCAAGAGCTTGCAGACGGGAGCCTGGGTGGCGGGGAATGCTACTCAGAACAA CTATATTGAACACTCGGATGTTCTGGCTTTTGCCGAAGACATGAGGTCTTGCGGCAAAGACGAAGGTTGCCAAAAGGACAAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGGGAGAAAGAAAGGTACAGCGACGAAAGTAAACTCAATGTACAGGAGGCCCAAAATACCTATGGTCCGCTGAGAGCAAAGGAGAAAAGGCTCCAAATCG TCGAGAGCATGGACACATTGGTGTCCATCCAGTGCGTGACGTCGCGATGCGAGTCGTACAAGACGGAATTGTTGGAGCAATCAGTCGATAGCTATATACA CCTGAGCAAGGTCCTCGATGAATGGGTGCCGACGCTGGACCGATTGGCGCTTATCGGAGGTGCTGCTGCAGGTAAGCAGATAGACTCGAAAGTCAAACGT CCGGGTATGCCGGAGCCTGTAGAGCTTGCGCAGGTTCAGAAGGCTGTGGATTATCTTGCAGCCCTAAAAGCGACTGGGGCATCAGGAAAACCGCTGGTTT CAAAGGGCTCAGAGGTGACCCCTGAAGTTATTCAAAAAGCATTGCAGGGTGATCGTGTTATTACTGCGCAAGGCGCTGTGTCATTACCTGCGGTGCAAAG
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Amino Acid Sequence |
>hypothetical protein
RAGDITNLYGDVYSLGRLDIARDDAGGWANRLENISGNLESTGDMRFSVSSLLNRRETLEIEGDLQNSAIGVRCTGCQLSERWGKTRSSSELVWIREYKS TLGESSAAASITAGRDLLVVGASLQNIASNISAVRDATLSLSNFENKGYALGEYAVRGVYSPPSKFGEELLMRILAYNAVNDPSYGEGYASTGGRLPNIH YFDKNFNEKVSPLEVIHGNGKNGGPGWHLYFGTLDVEYPDTDRWNKAIGRIPAPNYSSKKTDAIPDLLKGLAPLDELTINKGANSTVGAVVQAGGRVTVN AAESFNNSVLQGFQAVQETQLPHQDIAVSSTTSAVVTLKSQLPADLARQQINPLTLPGFSLPQGQNGLFRLASQGAQVNQASGALKSASDLTQSGHGVSV SAQTGSGASGWSTQARRVGDDRVTSLAGSAYQGRVAEAIDALRASAPISGDGGNTGRFQAGEHQATTGLGGLVEGNASGHSGNGVILADLRGGLPSFSSL PAADRVQGTVPGYDGNGTILANWQGAQATVQASPSTVRVEGVVSSPGGNGSILADLPAEQSSVQALPSAVRAQGSLPRLEERSALLAEPPVGQPALQTLP SVARVEGVPSNATPSNSHKYLIETNPALTELKQFLNSDYLLGGLGINPDDSKKRLGDGLYEQRLVREAIVQRTGQRFIAGLNSDEAMFRYLMDNAIASKD VLGLTPGVTLSAAQVAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLGPNGALIQGRDVNLITGGDLRNAGTLRAQNDLSATAGNIDNSGLIEAGNRL DLLASGSIRNDQGGIIAGREVSLSALTGDVINERTVTQHQSSYRGTGTTEAFADSAARIEAAQKLTVSAGRDVANIGGVIDSKGDLALQGGRDVLVSAAV AERGWTAGSQAYQTQTTQMGAEVVAGRDISVSAGRDISVVGSRIDARRDVTFEAGRDVGLVAAANEEHAYGKTKKVTFQDDKITQQATRVDAGGDLAINA GQDLRLIASQASAGDEAYLVAGDKLELLAANDSSYYLYDKKSKGSFGSKKTRRDEITDVTAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGA VTFEAVKDLHQESHEKSKGDLAWQSSKGKGQTDETVRQSQLVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQADPQLAWLKQMEQRGDVDWRRVQE LHDSWKYSNSGLGVGAQLAIAIVVTYFTAGAASGAIATAGAGTSMAGATAAATATTSAGWLNAAGTAALSGVASNGAISTINNRGNLGDVVKDVTSSDAL RGYVVAGTTAGLTAGVYDKWTSTQTGTSTALPNTGAVAPAAGLGTWQGVGQFTSNQLLQNGTSVLLDRALGGKGSLGDALQNSLANAFAAYGFKLIGDTT HGVLDDGSLGKIGLHALMGGLAAEAAGGDFRTGALAAGVNEALVDSLAKQYASLPIDDKKGLLTMSSQLIGMLAASTQGDADAKSLQTGAWVAGNATQNN YIEHSDVLAFAEDMRSCGKDEGCQKDK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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