Strain | Pseudomonas aeruginosa strain AZPAE14402 AZPAE14402_contig_4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGTTGCTCGAACAGGCTGGGGTGCAGGCGGATGTCCACCATCAACCAGTCGGCCACGATGAACAGCGTCCAGATCAGGAACGCCACCCCGATGGCAGCG CGCCGCTGCATCAGCGAGTTCCAGCTGAGAAACTCGCGAAACTCGTTTTCCAGCTCCTTTTCGAACCGCAACCAACGAAAGCCGTTGCGCAACTGGCGCG CATACGGATTATCCGGCAGACCAGCCTGTACCAGGCTGTCGCGTGCAAGCATGCTGACTCCCCTACCTCGGACCGAACGCTGAAACAGGCCTGGACGACA ATACCCTGGCGCCTCTGCAGCGATGAGTCAAAAAGCCATCACCCGTTACCAGACAATAGGGCATGCGGCGTGCCGAGGCGATACCAACCATCGGCGCAGC GGGACGCCCCGGCGAGCGAATGGCAAGATCCGTGGGCCGACTGGCATTGCGGCCAGGCCCGAAGGACGCCAGACTGCCGCCATCGCCATGAGGTTGTGCC
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DNA Sequence for Gene |
>NQ60_RS04380
ATGCCCGAACCGCGCCTGATTGCCTGCCTGATCTATCCCGACGTGATGAGCCTGGACGTGACCGGACCGCTGCAGGTATTCGCCTCGGCCAACGTCGAAC GCCAGCGCCAGGGCCTGCCGCCTTTCTACCGGATACAGGTGCTCGGCGAGCGTAGCGAAGCGGTGCCCAGTTCTGCGGGCATCCGCATCTGCGCCGACCT CGCCTGGCGCGACTGTCCGCCGGAAAGCCTGGACACCCTGTTGGTGCCCGGCGGCCTCGGTGTCGAGGCGCAGTCCCGCAACGCCGACCTGCTCGCCTGG CTGAAAGCCGCCGAACCGTGCATACGGCGGCTCGGCTCGGTGTGTTCGGGAGCGCTGATCCTGGCCGCCGCCGGGGTTCTCGACGGGCGCCCGGCGACCA CCCACTGGGCCGACGTGGCGACGCTGCGCCAGGGGTTTCCCGGCGTCCATGTGCAAGGCGACCGCCTGCACACCTACGACCCGCGGTGCCGCGACGGCGA CGCCCACATCTTCACCTCGGCCGGCGTCACGGCGGGAATCGACCTGGCCCTGGCGCTGGTCGAGGCCGACCTCGGCCGCAGCCTGGCGCTCAGCGTCGCG CGACGCCTGGTGATGTTCCTCAAGCGTCCTGGCGGCCAGGCCCAGTTCAGCGCCTGGCTGACCCCGGAACCGAGCCGCACCCCGCGCCTGGCCGCGCTGC TGGAGTGGATTCCCGCCAACCTCGCCGGCGACCTGTCCCTGGAAGCCCTCGCCGACCGGGCCTGCATGAGCCCGCGTACGCTGTCCCGGGTATTTCTCCA GGAACTGGGCGTGGCGCCCGGTCGCTACGTCGAGCGGGTTCGCCTGGAGGCCGCGCGCGCCCTGCTGCAGGACGCCCAGGCATCGATCGCCACGGTGTCC CGGCTGTGCGGCTTCGGCCATCCGGAAAACCTCCGGCGGACGTTCCACAAGCATCTTTCGGTCAGCCCCCAGGAATACGCCGAACGCTTCGGCATGCTGG CCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCTCCCACCGAGGACCTTCCCATGCTGGAACTGCGCCCCAACTGCGAGTGCTGCGACCGCGACCTGCCCGGCGACAGCGGCGACGCGCTGATCTGCACC TTCGAGTGCACCTTCTGCCGCGATTGCGCGACGACCCACCTGGGCGGCCAATGCCCGAACTGCGGCGGCGAACTGCTGGCCCGGCCAAGGCGTCCGCGGG ATGCGCTGGTCCGTCAGCCTGCCTCCAGCCGGCGCGTCGTCAGGCCCGGCGGTTGTCCGGAGTGACGCCATGCTGCTACGCAACCCGACCCTGCTCCTGC TGTTCTGCGGCCAGGCCCTGTACTGGTCCTGCTCGCTGATCGGCATAACCCTGACCGCCCTGGTCGGCGTCCAGCTGGCGCCGTTGAACAGCCTGGCCAC CCTGCCCCTGGCCCTGCTGGTGCTGGGCAACCTGCTGGCGGTGCAGCCGTTGTCGCACTTCATGCAGCGCCACGGCCGACGTCCCGGGCTGATGCTCGGC
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Amino Acid Sequence |
>transcriptional regulator
MPEPRLIACLIYPDVMSLDVTGPLQVFASANVERQRQGLPPFYRIQVLGERSEAVPSSAGIRICADLAWRDCPPESLDTLLVPGGLGVEAQSRNADLLAW LKAAEPCIRRLGSVCSGALILAAAGVLDGRPATTHWADVATLRQGFPGVHVQGDRLHTYDPRCRDGDAHIFTSAGVTAGIDLALALVEADLGRSLALSVA RRLVMFLKRPGGQAQFSAWLTPEPSRTPRLAALLEWIPANLAGDLSLEALADRACMSPRTLSRVFLQELGVAPGRYVERVRLEAARALLQDAQASIATVS RLCGFGHPENLRRTFHKHLSVSPQEYAERFGMLA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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