Pseudomonas aeruginosa AZPAE14402, NQ60_RS22215 (alr)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14402 AZPAE14402_contig_20, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGTACCGAAGGCCTGGATATTTCCCGCTACAGCAATTCCCCGGAGAACGCCAAGAATGCCCATCCAGCGCCAGCACACTAACGAGCGTATGAGCCAGAT CGTCGTCCACAACGGCACCGTCTACCTGGCGGGCCAGGTGGGCGAGGACATGTCCGCGGGCGTCGAGCAGCAGACCCGCGAGACCCTGGCGGCCATCGAG CGTCTGCTGGAAGAGGCCGGCACCGACAAGACTCGGATCCTCTCGGTGACCATCTACCTGAAGGACATCGACGCCGACTTCGAAGGCATGAACCGCGTCT GGGACCAGTGGCTGCCGCGCGGCGTCGCGCCGGCGCGCGCCACCGTCGAAGCCAAGCTCTGCGAGCCGGAGATCCTGGTAGAGATGTCGGTGGTCGCTGC GCTGCCCTGAGTTTTGTCTGGCCCGGCCGGAGAGCCGGGCTTTTTTTCGCCTGATGAAAGGTGCGCGATGCCGCACCTCGCTGAAGAGAGACCCGTCGCC
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| DNA Sequence for Gene |
>NQ60_RS22215
|alr
ATGCGCCCCGCCCGTGCCCTGATCGACCTGCAAGCCCTTCGTCACAACTATCGGCTGGCCCGCGAGGCCACCGGCGCCCGTGCGCTCGCGGTGATCAAGG CGGACGCATACGGCCACGGCGCGGTGCGCTGTGCCGAAGCGCTGGCGGCCGAGGCCGATGGCTTCGCCGTGGCCTGCATCGAGGAGGGCCTGGAGCTGCG CGAGGCCGGTATCCGCCAGCCGATCCTGCTGCTGGAGGGCTTCTTCGAGGCGTCCGAGCTGGAGCTGATCGTCGCCCACGACTTCTGGTGCGTGGTGCAT TGCGCCTGGCAATTGGAGGCGATCGAACGCGCCAGCCTGGCCCGCCCGCTGAACGTCTGGCTGAAGATGGATTCGGGCATGCACCGCGTCGGCTTCTTCC CCGAGGACTTCAGCGCCGCCCACGAGCGCCTGCGGGCCAGCGGCAAGGTGGCGAAGATCGTGATGATGAGTCACTTCTCCCGCGCCGACGAACTGGATTG CCCGCGCACCGAGGAACAGCTCGCCGCCTTCGCGGCCGCTAGCCAGGGCCTGGAAGGCGAGATCAGCCTGCGCAATTCGCCAGCCGTGCTCGGCTGGCCG AAGGTGCCCAGCGATTGGGTACGTCCGGGCATCCTGCTCTACGGAGCCACGCCGTTCGAGCGCGCACATCCGCTGGCCGATCGCTTGCGCCCGGTGATGA CCCTGGAATCGAAGGTGATCAGCGTCCGCGACCTGCCGGCCGGCGAACCGGTCGGCTACGGCGCGCGCTACAGCACCGAGCGTAGCCAGCGCATCGGCGT GGTCGCCATGGGCTACGCCGATGGCTATCCGCGCCACGCCGCCGACGGCACCCTGGTGTTCATCGACGGCAAGCCGGGGCGCCTGGTTGGCCGGGTATCG ATGGACATGCTCACCGTCGACCTTACCGACCATCCCCAGGCCGGGCTGGGCAGCCGGGTCGAACTATGGGGCCCGAACGTGCCGGTCGGCGCCCTGGCGG CGCAGTTCGGCAGCATTCCCTACCAGCTGCTGTGCAACCTGAAAAGGGTGCCGCGCGTCTATTCCGGGGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAAAAACTTTCCGAATTCTTTGCGCAGGCATGTCGACCGATCTGTTGTAAATACTGAACAGTGTTGCCATGATACGGCCGACTTGGGGACGCCAGCCGTG TGCGGCCTCGTTTTGCCTTGCCTGCCAGAAGAATAAGGAGGACTCCACCCTTGGACGTCGGTGCTCGTCTGCAAACCATCCGAAAGCTCAAAGGTCTTTC CCAGCGCGAACTCGCCAAACGGGCGGGTGTCACCAACAGCACTATCTCGATGATCGAGAAAAACAGCGTGAGCCCTTCCATCAGTTCGCTGAAGAAGGTG CTGGGCGGTATCCCCATGTCCCTGGTGGAGTTCTTCTCCCTGGACCTGGAGCAGGACAGCCATACCCAGGTTGTCTACAAGGCAGACGAACTGATCGACA TTTCCAGCGGCGCGGTGTCCATGCGCCTGGTGGGCAAGGCGCACCCGAGCCGGGCGATCGCCTTCCTCGACGAAACCTACCCGCCGGGCTCCGACACCGG
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| Amino Acid Sequence |
>alanine racemase
MRPARALIDLQALRHNYRLAREATGARALAVIKADAYGHGAVRCAEALAAEADGFAVACIEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVH CAWQLEAIERASLARPLNVWLKMDSGMHRVGFFPEDFSAAHERLRASGKVAKIVMMSHFSRADELDCPRTEEQLAAFAAASQGLEGEISLRNSPAVLGWP KVPSDWVRPGILLYGATPFERAHPLADRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERSQRIGVVAMGYADGYPRHAADGTLVFIDGKPGRLVGRVS MDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNLKRVPRVYSGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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