Strain | Pseudomonas aeruginosa strain AZPAE14402 AZPAE14402_contig_12, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AACGACGACACCCTCGAGCGCCAGGTCGAGACCACCCGTACGCTGCTCGACGAACTGCAGGCCAGGCGCACGCCCTGGCTGCTCGGCGGCGACCTCAACC TGCTGCCGCCCGGCCAGTATCCCTACCTGCTGGCGCCGCTGCGCGCGCCCTACCGGGAAGACAGCGAACTGGCCATCCTGAGCGGGCGCTTCCCGATGGT GCCGTCGCTGGAAGAGGCCAGTGGCGTCGACCAGGTTCGCTGGTACACGCACTTCCCCAACGACCCACGGGTCCAGGGGCCGGATCGGACCCTCGACTAC CTGTTCCACAGCCCCTCGCTGACCCGTCTCGATGCCCGGGTCCGGCGCAGCGATACGCTGCAGATCTCCAACCACCTGCCGCTCGCCGCGCGCTTCCTGC TGCCCCATTGACCGGGCGCGCGCCGGGCTGGACAAGCGGCCCGGCGCGCCGCATGCTTCGCTCCCATTCATAACAACAAAAAACGGCAAGGCCGCACACC
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DNA Sequence for Gene |
>NQ60_RS16610
ATGCCCCTACGCACCACAACGCCCCTGCTCGCGCTGCTGGCGTTCGCCCTGCTGGCCGCCCCGCAGCTCCATGCGCAGGACGCAAGGCCGTCGTTGAACG TCGGCTACTACGAATTCCCCCCCTACATCTATACCGCCCGGGATGGCCACGCCGCCGGTTCCGGCGCCCGCCTGGTCCGCCTGCTGCTGGAGCGGGCCGG CTATCGTCCGGCGTTCCGCGCCCTGCCCAGCGCGCGCCTGTACCTGGGGCTGCAGGATGGCAGCGTGGCGCTGTGGGCCGGCGCGGCCAAGCCGGAGCTG GCCGCCGACACCCTCCAGGCGCGGCGCGTGCTCGGCCACGTCAGCCTGAACCTGTACTACCCGGCGCACCATCCGGCACCGCGGGTTCCCCAGGACCTGG CCGGACGCCGGCTGATCCTGATCAGCGGCTACAGCTACTGGAAACCGGTCACCGACTTCATCCAGGACCCCAACCTGCACCTGCGCCTGTACCGCACCGG CACCCACCACGCCGCCTTGCGCATGCTCGAACTCGGGCGCGGCGACTACCTGCTCGACTACCAGGCGCCGGTGGAAGCGGCCAGCCGCCAGGCGTTGGCA AGCCAGGAACTGTACCGCCTGCCGCTGCGGATGATCGTCTCGCGCCACATTCCCGGCGCCGAAGCGCTGCGCGACCGCCTGGACCAGGCCTACGACCAGT TGCGGAGCGACGGCGCCGACCTGTCCCTGCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCGACCCCGGAGGAGGAGCCCGATGCATACCGCCATCCCCTGCTGCACGATCAACGGCGAACAGCCCGCCCTGCGCGGACAGGTCTGCCAGTCGCTGCT GATCCAGGAATGGTGGTGGGAAGGCCGTCCAGCCGATCCGGTGAACGTGGTCTACCTGCAGTTCGAGCAACGCTGGTATCGCCTCTACTTCGAGGGCGAG ACGGTGTTCTGGCGCAGCGGCGAAGCGCCGCGGCCCTGCGAGAACGACGAAGGCCCGGGCGAGTACCGCCTGCACGACCTCGGCCGGCAGCGCGGCCTGG CCGGTGTGCGCCTGCTGGCCCTGGAGTTCGTCCTCAACGGCCCGACCCTGGACAGCCACTTCGACTTCGCCGACGGCCAGCGCCTGAGTTTCCGGCACTT CCTCGACGACGACCTGACCCGGGTGCTCTGAGCGCCGTCGACTACTTGCGTGGCTTGGCCCGGGCAGTGGCCTCGGCCACCAGCGGGTCGTCCGGCCAAT
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Amino Acid Sequence |
>hypothetical protein
MPLRTTTPLLALLAFALLAAPQLHAQDARPSLNVGYYEFPPYIYTARDGHAAGSGARLVRLLLERAGYRPAFRALPSARLYLGLQDGSVALWAGAAKPEL AADTLQARRVLGHVSLNLYYPAHHPAPRVPQDLAGRRLILISGYSYWKPVTDFIQDPNLHLRLYRTGTHHAALRMLELGRGDYLLDYQAPVEAASRQALA SQELYRLPLRMIVSRHIPGAEALRDRLDQAYDQLRSDGADLSLL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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