Pseudomonas aeruginosa AZPAE14403, NQ61_RS28760

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14403 AZPAE14403_contig_30, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATAGATGTATATTACTATAATTCATCGGTGTCGGTACCGAAAGAATTTGCCGACGGCAATTACCATAAAGACGGGGTACTCTTTGATGCGCAAGGCAATG TAGTGCTAACGCCAAGATTTCGAGCTTCGGAAGCAAGACAGAGAGTACCTTAAGAATAATTTAGCGCCATCTCAAATAAAAAGGAAACGAGTAATGGGAT ATCTATTTTTTGACACTTCATAACCACAAAATAAGCCTCCTCCATCCCCCTTTATGAACTCTGACCAAGTCATCATTATGGCGCTGAAATTCTGGTCTGG AACGTACAGCACATGGACAACCAATCCACATCCACTCATTCGATGGCCTTTTGGGAAAAGCTGGAGTTCCTCGACAATACTTGGCCAACCGATGAGGAGC GATCATTTTCCGGTGATCTATACGTGGATGGAAAAATCGGGATGAAGGTCGTCTTGAGGTTATTCATCATTCCTTCGGGCTGGCATGACAAGGCACACTA
DNA Sequence for Gene
>NQ61_RS28760
ATGCCCCGTCCCACCGACACCAATACCACCCTCTCCCTCAGCGCCTCCACCCTGGGTGATCTTTACCCCCAGACGCTTTCCGGGGGCGAGGCGTTGAACG AGCTGGGCAGCCTGACGCTCGGCGGCTACAGCGCCACCGCGCTGACGTTGAGCAATGCGGTGGCCACCCATCTCACCGCCACCCTGCACAACGACGCCGA CCAGCGTCCGCTCGACGGTCTGGTCGCGGAGATCCGCCAACTCCCCGGCGATGCCAGCGCCGAGCGCTACCAGGTGCTGTTGCGCCCCTGGCTCTGGTGG CTGACGCTGGCCAGCAACAACCGGGTGTTCCAGAACCTGGCCACCAGCGACATCGTCACCCAGGTCTTCGACCAGCACGGCTTCAGCGACTACCAGTTGC AGCTCAGCGGCAGCTACCAGCCCCGCGAATACTGCGTGCAGTATGGCGAGAGCGACCTCGCCTTCGTCTCGCGGCTGCTGGAGGAAGACGGCATCTTCTG GTTCTTCACCCATGCCGCCGGCAAGCACACCCTGGTGCTGGCCGACAGCAACGACGCCTTCCCGCCGATTCCCAACGGCCCGCAAGTGGCCTACCTGGGC CAAGGAATCGGCGTGCGCGAGTTGCAGGGCGTGCGTTCGGCGCAGTACAGCCTCCAGGCGGTATCCGGGACCTACAGCGCCACCGACTACGAGTTCACCA CCCCGGGCACCTCGCTGTACTCCCAGGCCGAGGCGGTTTCCGGCGCCGCCGGCGTCTACCAGCACCCCGGCGGCTACACCGCCAAGGCCCAGGGCGACAG CCTGACCAAGCAACGCATCGACGGCCTGCGCAGCCAGGAGACGCGCCTGATCGGCGAGAGCGACTGCCGCTGGCTGGTGCCCGGCCACTGGTTCACCCTC AGCGGGCATGACGACGATTCGCTGAATATCGACTGGGTGCTGACCTCGGTCACCCATGACGCCACTCACGCGCACTACCGCAACCGCTTCGAGGCGATCC CCAAGGCCACCGCCTACCGCCCCGCGCGGGTCACGCCCAAGCCGCGCATGCACACCCAGACCGCCCTGGTGGTGGGCAAGGCCGGCGAGGAGATCTGGAC CGACCAGTACGGCCGGATCAAGATCCAGTTCCCCTGGGACCGCGACGGCAAGAACGACGAGACCTCCTCCTGCTGGGTGCGCGTGGTGCTGCCCTGGAGC GGCAAGGGCTTCGGCATGCAGTTCGTGCCGCGCATCGGCCAGGAAGTGATCGTCACCTTCATCGACGGCGACCCGGACCGCCCGCTGGTCACCGGCTGCG TCTACAACGGCGACAACGCCCTGCCCTACGCGCTGCCGGACAACCAGACGCAGTCCGGGATCAAGACCAACTCGTCGAAGGGCGGCGGCGGTTTCAACGA GCTGCGCTTCGAGGACAAGAAGGACGCCGAGGAAGTCTTCCTCCAGGCGCAGAAGGACCTCAACGTCAACGTGCTCAACGACAGCACCGCCAGCATCGGC CACGACGAGACCCTGACGGTGCAGAACGCCCGCACCCGCACGGTGAAGGAAGGCGACGAGACCGTCACCCTGGAGAAAGGCAAGCGCACGGTGACCATCC AGACCGGCAGCGACAGTCTGGATGTGAAGGACACGCGCACGGTGATGGTGGGCGCCGACCAGACCCACAGCACCGGCGGCAACTACAGCCACAAGGTCAG CGGCAACTTCGAGCTGACGGTGGACGGCAACCTGACCATCAAGGTCAGCGGCACCCTCGCCCTGCAGAGCGGCGGCAGCCTGACCCTGAAGAGCGACGCC GACCTCGCCGCCCAGGCCGGCACCTCGCTGACCAGCAAGGCCGGGACGTCGCTGACCAACCAGGCCGGCACCTCCCTCACCAACAAGGCCGGCACCAGCC TGACCAACGATGCCGGCGTCAGCCTGACCAACAAGGCCGGCGCCGAACAGACGGTGGACGGCGGCGGCATGCTGACCATCAAGGGCGGCCTGGTAAAGGT CAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGAAGCGCATGGCGGCATCCGGCAAGCTCGACCTGGTTCGTGGCGACAGCCATCTCGCCGGCAACCTGCTCGACGGCAGCCTGGAAGGCCCGTTGCGC ATCGACGAGCACGACAGGCCGCAGGCCAGCCTCGGCTACCGGCAGGGCCAGTTGCACGGCGCCAGCACCCTGTTCCATCCCAACGGCAAGGTCTCCGCGC AACTCGCCTTCGTCGACGGCAAGCTGCACGGGCCGGCGAGTTTCCATGCCGCGGAAGGCTGGTTGCAGCGCAAGGCGCACTACCGCAACGGGCTGCTCCA CGGCGAAGCGTTCAACTATTTCGCCAACGGCCAGGTGGCCGAGCGCGAGCATTACCGCGACGGCGTACGCGACGGGGTCTACCAGCGCTTCCATGGCAAT GGCCAACTGGCCTTCGACGGACGCTACCTGAACGGCCAGCTACTGGACGGCGCCCAGCCGTTCGCCGATGACGGCCGGCCACTGGACAGCGAGGGCAGGC
Amino Acid Sequence
>type IV secretion protein Rhs
MPRPTDTNTTLSLSASTLGDLYPQTLSGGEALNELGSLTLGGYSATALTLSNAVATHLTATLHNDADQRPLDGLVAEIRQLPGDASAERYQVLLRPWLWW LTLASNNRVFQNLATSDIVTQVFDQHGFSDYQLQLSGSYQPREYCVQYGESDLAFVSRLLEEDGIFWFFTHAAGKHTLVLADSNDAFPPIPNGPQVAYLG QGIGVRELQGVRSAQYSLQAVSGTYSATDYEFTTPGTSLYSQAEAVSGAAGVYQHPGGYTAKAQGDSLTKQRIDGLRSQETRLIGESDCRWLVPGHWFTL SGHDDDSLNIDWVLTSVTHDATHAHYRNRFEAIPKATAYRPARVTPKPRMHTQTALVVGKAGEEIWTDQYGRIKIQFPWDRDGKNDETSSCWVRVVLPWS GKGFGMQFVPRIGQEVIVTFIDGDPDRPLVTGCVYNGDNALPYALPDNQTQSGIKTNSSKGGGGFNELRFEDKKDAEEVFLQAQKDLNVNVLNDSTASIG HDETLTVQNARTRTVKEGDETVTLEKGKRTVTIQTGSDSLDVKDTRTVMVGADQTHSTGGNYSHKVSGNFELTVDGNLTIKVSGTLALQSGGSLTLKSDA DLAAQAGTSLTSKAGTSLTNQAGTSLTNKAGTSLTNDAGVSLTNKAGAEQTVDGGGMLTIKGGLVKVN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site