Pseudomonas aeruginosa RP73, M062_26785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa RP73, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGAAACGCCACCAGCTTGCCGTTGCGCCGCCAGTCGAAGCCATCGAGGCCATCCTCCTCGCGCCAGGCCTGCAGGGTGCGCTGGCTGAGCAATGCCAG GCGCAGCAGGTGCGCGGCATTGCGGCGGTTCAGCGAGCCGCGGCAGGCCGCGAGGAAGCCCAGCAGCCAGCGCCACTGCGCCGGATCAAGGCGCGGCCGC AGGCGCAACGGCGCATCGTTGCGCAGCAGCCAGCCGAGCGTCTGGGCCGGCACGCCGCTGTCGGCCAATGGCGCCACGTAGCGATAGGACAACTGCCCGC CATTGGCGTAGCTGGTTTCCAGCCCGCCCCGCTCGCGCGCTTCCACCAGGGTCACGTCGAATCCTTCGCGAACCAGGGCGTAGGCCGTGGCCAGGCCGAC CACGCCGGCGCCGATGATGCAAACCCGCTGAGCCATGACAATCGTTATCCAGGTGTTTTCCAGGGCTTCGACGATAGGCGCGGATGACAGCGGTAGGACA
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| DNA Sequence for Gene |
>M062_26785
ATGAATAAAGATGGCCAGGGTATAAATCCAGGTTATGGGATCGCGCCGATGAAGCTCCGCCATATCGAAGTGTTCCAGGCGATCCGCCAGGCTGGCTCGG TCAGCGGCGCCGCACAGTTGCTGCATGTGTCCCAACCGGCGGTGAGCAAGGTCCTGCAGCACGCCGAGCAGCAACTGGGCTTCCCGCTGTTCTTGCGAGT GCGCGGCAAGCTGCTGGCGACTCCGGAAGCGCTGGAACTGGAGCGCGAAGTGGCCAAGCTCAGCGATAGCCTGCAGGCGGTGCGGCGCCTGGCGCAGAAC CTGCGGCGCCAACCGGGCCACAGCCTGCGCATCGGCGCCACCCCGGCCCTGGCGCTGTCGCTGCTGCCGCGGGCGATCGGCGAATGGAGCGCGCGCTATC CGCAGAGCGGCTGCGAACTGGCCACCTTGCATTCGCGCGAGCTGGTGCAGGGCCTGCTGATGCGCGAACTGGACCTGGCCCTGAGCCTGAAGCAGCCGGA ACACCCCGGCCTGCGCGGCGAAGCCATCGCCAGCGGCGTATTGGTGGCCCTGGCGCCGCGCGAACACTGGCCCGAAGCGGAACGCCGGCAGCCGCTGAGC CTGGCCGGGCTGGCCGGCGAAGCGCTGATCGGGCTGTCCACCGCCGACCCGCTGTTCGCCCGCCTGGAGGATTACCTCAGCGCCGTGGAGCCACCGCCGC AGGTGAAGATCGCCGTGCAGACCTACGCCCTCGCCCGCGCCCTGGTGGAGGCTGGGGCCGGCCTGGCGCTGGTCGATCCCTTCACCGCCCTCGGCGCCGA CCCGCACAGCACCGCAATCCGCCCATTGAGCCCGGCCTTCCCGGTCACCCTCTACGCCATCACCCGCGCCGACGAAACCCCGCCGCACACCCTAGCTCCG CTGCTGCGGATGCTCGCCCGCCAGGCCGAGGAGCGTTTGCGGGCCGTGCAGATGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CATTTGCCGCCTGGCCTGCCGCTGGAAACCTTGGACGTCGTTCTGGCCCACGCCTCGCGTACTTACCGCTCCGGCTTCCAGTCTGGGTGGTCCGCGTCGT AGCCCTGGGTGGGATGAGGAGGCAGAGGATAGTCCTCTATCAGATTGGGGAAACGTAAGTCGGGGTCAGCTTCAAGCTTTTTGTAGATTGAATAATACGC TTCTCGCAACTTTTCGTCGGGGGCGTACCACATTGCACTTGCAGGGGGAGTCTCACTTCCGAAGACTCGTGATAGGAAAAAAGCCGCACTCTTGCCCCCC TGAGAGACTGACACCTGATAATAAACCAGTGCCTTTGGGAAATTGTGCTCTACTATCTTGTAATACGCCCCCAGCTCATAACTAGCCGGCGCATAACCCT GACTAGCAGCACAGTGAGTATACGCCAACCCCAAATCCTTTTTTTTGGCCACATATATATAAAGCTTACCTAGTTCAGTTAGTGCCGGCGGATTTCCTAG
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MNKDGQGINPGYGIAPMKLRHIEVFQAIRQAGSVSGAAQLLHVSQPAVSKVLQHAEQQLGFPLFLRVRGKLLATPEALELEREVAKLSDSLQAVRRLAQN LRRQPGHSLRIGATPALALSLLPRAIGEWSARYPQSGCELATLHSRELVQGLLMRELDLALSLKQPEHPGLRGEAIASGVLVALAPREHWPEAERRQPLS LAGLAGEALIGLSTADPLFARLEDYLSAVEPPPQVKIAVQTYALARALVEAGAGLALVDPFTALGADPHSTAIRPLSPAFPVTLYAITRADETPPHTLAP LLRMLARQAEERLRAVQM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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