Strain | Pseudomonas aeruginosa strain AZPAE14403 AZPAE14403_contig_17, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCGCCGGCGAGAGCCTCGACGACGGCCTGCTGGACCTGCGCCTGGGCGCCGACGGCAACTACTTCGACCTGCTGATGACTGCGGCGCCGGGCAGTGCCT CGCCGACCTTCCTCGACGAGAATGTCCTGCGCGAGGGCGGGGGCGAGTTCCTCATGCGCGGCCGGCCGATGTTCGAGCATGCCAGCCAGACCCTGGTACG GATCGCCGGCGAAATGCTCGCGGCCCATGAGCTGACCCTGGACGACATCGACCATGTGATCTGCCATCAACCGAACCTGCGCATCCTCGATGCGGTGCAG GAGCAACTGGGCATTCCCCAGCACAAGTTCGCGGTGACCGTGGATCGTCTGGGCAACATGGCTTCGGCCTCGACCCCGGTCACGCTGGCGATGTTCTGGC CGGACATCCAGCCGGGACAGCGGGTGCTGGTCCTGACCTACGGCTCCGGCGCGACCTGGGGCGCGGCGCTGTACCGCAAACCTGAGGAGGTGAACCGGCC
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DNA Sequence for Gene |
>NQ61_RS22420
ATGTTGAGGCTTTCGGCTCCCGGTCAACTGGATGATGACCTGTGCCTGTTGGGGGACGTCCAGGTGCCGGTGTTCCTGCTGCGTCTCGGTGAGGCGAGCT GGGCGCTGGTTGAAGGAGGGATCAGCCGGGATGCCGAATTGGTTTGGGCGGACCTGTGCCGCTGGGTCGCCGACCCGTCCCAGGTGCACTACTGGCTGAT CACCCACAAGCACTACGACCACTGCGGCCTGCTGCCCTACCTGTGTCCGCGGCTGCCGAACGTACAGGTCCTGGCGTCCGAGCGGACCTGCCAGGCCTGG AAGTCGGAAAGCGCGGTGCGGGTGGTCGAGCGCTTGAACCGGCAACTGTTGCGTGCGGAGCAGCGGTTGCCCGAGGCCTGTGCCTGGGACGCTCTGCCGG TTCGCGCGGTGGCCGACGGCGAGTGGCTGGAGCTGGGACCGCGGCATCGCCTGCAGGTCATAGAGGCCCACGGCCACAGCGACGATCACGTGGTTTTCTA CGACGTGCGACGCCGACGCCTGTTCTGCGGCGATGCCCTGGGCGAGTTCGACGAGGCAGAGGGGGTGTGGCGGCCGCTGGTGTTCGACGACATGGAGGCT TACCTGGAGTCCCTGGAACGTCTGCAGCGTCTGCCGACCCTGCTGCAACTGATCCCGGGACACGGCGGCCTGCTGCGGGGGCGGCTGGCCGCGGATGGGG CCGAGTCGGCCTATACCGAGTGTCTGCGCCTGTGCCGGCGGTTGCTCTGGCGCCAGTCCATGGGCGAATCCCTCGACGAACTGAGCGAGGAGCTGCACCG CGCCTGGGGTGGGCAGAGCGTCGACTTCCTGCCCGGCGAACTGCACCTGGGGAGCATGCGCCGGATGCTGGAGATTCTCTCCCGCCAGGCGCTGCCTCTG GACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACGGGACATCCATTGCGGCGATCGCCGCCGACGGCAGCGGTCGCAATTGGGGGAAAAGGGGGGTTACCGATGATGAACATGCCGTTGCGCGCTAGCGTC GCGCAGGCCAGTCGCCCATGGGCGCGAGGAGGTGGCTCGTGAGCGGGGTTGGCTATCGACTGGAAGAAAGTCTGGAGTACCGCACGCTGGTGCCGGAGGC GCTGTCGATCTGGCGCATGGCCGGCGCCAACCGGATGCTGTTCGACTGCTTCGACGTGGACAGCAAGGCTGCGCGGCGTAGCGTGGCGATCCTTTCCAGC TGCCTGCGCATCGAGTGCTGGGGGCGCGATGTGGTGCTGCGGGCGTTGAACTCCAACGGACGCGCCTTGCTGGCGCCGTTGAGCGAGGACTGTCCGGCCC AGGTCACCTGCTTGCGTGACGGCGACACCCTGCACTGGCGCTTCCCCCAGGAAGAGTCGCATGCGGACGAGTGGCGACGCCTGCATGGCCTGTCCAGCCT
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Amino Acid Sequence |
>hypothetical protein
MLRLSAPGQLDDDLCLLGDVQVPVFLLRLGEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAW KSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDVRRRRLFCGDALGEFDEAEGVWRPLVFDDMEA YLESLERLQRLPTLLQLIPGHGGLLRGRLAADGAESAYTECLRLCRRLLWRQSMGESLDELSEELHRAWGGQSVDFLPGELHLGSMRRMLEILSRQALPL D
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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