Strain | Pseudomonas aeruginosa RP73, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GAACAACTGGTGGCGGTCTGCGCGCCATCCCTGCTGCCGGCCGGCGGACTGGACGAACCGACCCAACTGGCGGGGCTGGTGCTGCTGCAGAACGCCAGCC GCGCGGAGGCCTGGCACGACTGGTTCGCCAGCCTGGAGCGAAATTGCCAGGGTTGCTACCACGGTCCACGCTTCGACACCTTCTACATGTGCATCCGCGC CGCCCAGGCCGGTTGCGGGGTAGCCCTGCTACCGCGCTTCCTGGTCGAGGAGGAACTCGCCGAAGGCAAGCTGGCGATCGCCTGGCCGCACGCCCTGCCC AGCCAGGAGGCCTACTACCTGGCCTATCCCGAGCATGCCGCGGAAGTCCCCAAGGTGCGCCATTTCATCGAGTGGATGGTAGAGCGCCTGGAGCAGGAGC AACCCTCAGCGGGCCCCCGCCAGACGCGCCACGGCCCGGTTTGACGTTTCCGCTGCGCGGAACCATCTTTACTCTCACTCGGTTCACCTCGGAACGTCCC
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DNA Sequence for Gene |
>M062_25925
ATGCTCACTGGCGTCACGGTTCGAATCCGCCTGCTGGTCCTGGCGCTGCTACCGCTGACGATGCTCGTCACGGTCATCGCGATGGCGCTGGCCAACGCCA GTCGACTCGATGCCAGCTTCCAGGACCTTTTCAACAACCGGATGAAGCCCATCAGCCAGCTCAAGATCGTCGCCGACGCCGTTGCGGTCAGCGTGGTCGA CGCCCTGCACAAGTACCGTGCGGGGGTCTTCGATGAAGAGCGCCTGCAGCAGGAGTTGAGTGGGGCGCTGTCGCGCATCGAGAAGTCGTGGGCCGACTAT TCCGCAGACCACCGGACTGCCGCCGAGAAGGAAATCATCGAGTCGCTGGTCCCCACCCTGGAACGGGTCAAGCGGATGACCCTGGCATACGGCGAGCAGG CCAGGGCCGGAAGCCTGCGAAACGTCGAGGCCGGCACGTTCAATCGCGAGATGTATGGTGCGTTCGATCCGCTGGGAACCGCGCTGTCGACGCTGATCGA CCTGCAGCTCAGTGAAGGCGCCAAGCTCAACGAGCAGATGGAGAAACGCTACGACTCCATGCGCACCACCTTCCTGCTCATCGGCGCCGCAGCCCTGGTC CTCATCGTCGCCGCGGCCTGGTTCATCAGCCTGTCGATCATGCGCCCGCTTTCCGATCTGCGCGGGGTGATCCGCCGCGTGCAGGACTCCTCGAATCTCA CGCTCCGCGCCGATGCGCGCGGGCGCGACGAAGTGTCCGATACGGCGCGCGCCTTCAATATGATGCTGGAAAGCCAGCAGGCGCTGCTTCGGCATCTCGC CGAGACAGCCAGGAAGCTCACCATCACCTCGGACGAGATGAGTGCCATCAGCAACCAGGTCAGCCATGTCGCCACGTCCCAGGGCGACCAGACCGACATG GTCGCCACGGCGGTACACCAGATGAGCATGGCGGTCCAGGACGTGGCGCGGAACGCCCAGGCCGCCGCAGCCAGCGCGGAATCGGCGAACAGCGAGGCGC ACACCGGAACCGGACTCGTGCATGCGAACCTCGACGCCATCCAGGGCCTGTCGGTCATGGTCGGAGAGGCGGGAGCCGTCATCGACACGCTACGCAACAA GACCGAGGAAATCAGCACCGTTCTGGAAGTCATCCAGAACATCGCCCAGCAAACCAACCTGCTCGCCCTCAATGCCGCGATAGAAGCCGCACGGGCGGGC GAGGCCGGACGCGGGTTCGCGGTGGTCGCCGATGAAGTGCGCAGCCTGGCCACCAATACGCACAAGGCCACCGAAACCATCCGCGAGATGATCGAAGCCC TGCAGGCAGGCGCCAGCAGCGCGGTCAGCGTGATGCAGCAGTCACGCGAGCAGGCCCAGGTCAGCGTCCAGCGCGCCCACGAGGCGGGAAAGGCGCTCGG TCTCATCGCCCAGGCGGTCGAAGGTATCGCCCAGAGCAACGCGCAGATATCCACGGCGACGGAAGAACAGACCGCCACCGCGAGCGAGGTCAGCCAGAAC ATCGACTCGCTCAATGCCAGCATCGGCGAAGTCGCCGAGGGCGCGGTGAAGACCTCCACCTCCAGTGTCGAGCTGGCGAAGCTGGCAAACGGACTGGAGC AGCAGATCCAGCGCTTCACCGTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAAGCGCGGCAGGGAGCGGCCTCACCGGCCCTGCCGCACCCGTTTGTCAGGACGCCAGCAGGCTGCGGTCGAAAACGAAGGCGCCGCCCGGCTTCGGGGT GAAATGCAGGACGTGTTGCGGGCGCCCCATGGGCGGACGCTGGCGTTCGCCGGTGTCCTCGACCCAGCCAGCCTCCTTCATCCGCTCCAGGCGCCCGCGC AGGCTGGAATGCTGGACTTCCTGGCCGATGGCGCACTCGAAGGCCTTCAGCGCCTCGGCCACGGTGAAGCGCGGCGCCAGCAGGAACAGCGGCAGGGCGC TGTACACCGACTTGCTCGCCAGGCGCTCGCAGGCCTGCTGTACCAGTTGGGCGTGGTCGAACGGCAGGGCGAAGCGCTCGCTGCGAACGTCGCGCAGCGG CACGAAGTCGAGGTCGTCGTCCTCCACCCGGGTGTCCGGACCGACCAGCACCAGGTAGAACACGCTCAGCGACCAGCCGCGCGGGTCGCGTACCGCGTTG
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Amino Acid Sequence |
>chemotaxis protein
MLTGVTVRIRLLVLALLPLTMLVTVIAMALANASRLDASFQDLFNNRMKPISQLKIVADAVAVSVVDALHKYRAGVFDEERLQQELSGALSRIEKSWADY SADHRTAAEKEIIESLVPTLERVKRMTLAYGEQARAGSLRNVEAGTFNREMYGAFDPLGTALSTLIDLQLSEGAKLNEQMEKRYDSMRTTFLLIGAAALV LIVAAAWFISLSIMRPLSDLRGVIRRVQDSSNLTLRADARGRDEVSDTARAFNMMLESQQALLRHLAETARKLTITSDEMSAISNQVSHVATSQGDQTDM VATAVHQMSMAVQDVARNAQAAAASAESANSEAHTGTGLVHANLDAIQGLSVMVGEAGAVIDTLRNKTEEISTVLEVIQNIAQQTNLLALNAAIEAARAG EAGRGFAVVADEVRSLATNTHKATETIREMIEALQAGASSAVSVMQQSREQAQVSVQRAHEAGKALGLIAQAVEGIAQSNAQISTATEEQTATASEVSQN IDSLNASIGEVAEGAVKTSTSSVELAKLANGLEQQIQRFTV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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