Pseudomonas aeruginosa AZPAE14410, NQ63_RS09090
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14410 AZPAE14410_contig_7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAACTTTAGCCCTCCTTTCCGTTTTTATCTTTGTTATTGGAAATCAGTCATTTAGGCATTTCTCCGAATCCCCTTCGGAGAGCTACAGCCCAGGCTTCAC AAGGCCTGAACCGTTCCTAGGAATAACTCTACAACGATATTGAAGCGGTTAGAAACTGCACGTCACTGGTGCGTTCCACGCACTAATTGAGGTCCTCTTT TTCAATGAAAGTGCAGGACAGAGCGGTTTTTAAAATTAATATGAACATGAACTTCCCGGAATTCGGTACTTGGCGGAAAAAGTCGATTCGAATACGACAT GAACATATCCGTTAGCGACGCCACGTTCGGCGCAAAACCCTGTGACGGATTCGTCATAAGCCAGCGAATGCTCTATCGCGAGACTTGCCGGCAGTAATAA GCGTCGCCCGGCACTCCGGCAAGCGAGCTTTCCTCCCTACGTCATTCCGTTTATTCATATAACGCGTTCCGCCCGCTCCACCCGCGCCAGGAAACCCGCC
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| DNA Sequence for Gene |
>NQ63_RS09090
ATGCTGAACAAACGCCGCCTGCCGTCGATGACCGCCCTGCAATGCTTCGAAGCGGTAGCCCGGCACCTGAGCTTCACCCGCGCCGCCGAAGAGTTGAGCC TGACCCAGAGCGCCATGAGCAAGCAGGTCGCGCAACTCGAGGAGCAACTGCAGCACGCCCTGTTCCGCCGGGTGCGCAAGCGCTTGCAACTGACCCCGGC CGGCGAGCTGTACCTGGCCGAGGTACGACGCATCCTGCAACAGGTAGAGCTGTCCACCCGCTTCCTGCTTTCCTACGGCGGCGAGACCGAAGTGCTGCGA GTGGCGACCCCGCCGACCTTCGGCGCGCGCTGGCTGATCCCGCAACTGAACGGCTGGCGCCACCGCCACCCGAACATCCACCTCGACCTGCGCCAGGAAC TGGAACCGGACGACCTGCGCCAGGGCCATTGCGACCTGGCGTTCTTCTTCGGCCCCGGCACCCTGCCGGGCGCCGAGTGCATCCGCCTGTTCGGCGAACA ACTGGTGGCGGTCTGCGCGCCATCCCTGCTGCCGGCCGGCGGACTGGACGAACCGACCCAACTGGCGGGGCTGGTGCTGCTGCAGAACGCCAGCCGCGCG GAGGCCTGGCACGACTGGTTCGCCAGCCTGGAGCGAAATTGCCAGGGTTGCTACCACGGTCCACGCTTCGACACCTTCTACATGTGCATCCGCGCCGCCC AGGCCGGTTGCGGGGTAGCCTTGCTACCGCGCTTCCTGGTCGAGGAGGAACTCGCCGAAGGCAAGCTGGCGATCGCCTGGCCGCACGCTCTGCCCAGCCA GGAGGCCTACTACCTGGCCTATCCCGAGCATGCCGCGGAAGTCCCCAAGGTGCGCCATTTCATCGAGTGGATGGTAGAGCGCCTGGAGCAGGAGCAACCC TCAGCGGGCCCCCGCCAGACGCGCCACGGCCCGGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGTTTCCGCTGCGCGGAACCATCTTTACTCTCACTCGGTTCACCTCGGAACGTCCCATGCTCACTGGCGTCACGGTTCGAATCCGCCTGCTGGTCCTGGC GCTGCTACCGCTGACGATGCTCGTCACGGTCATCGCGATGGCGCTGGCCAACGCCAGTCGACTCGATGCCAGCTTCCAGGACCTTTTCAACAACCGGATG AAGCCCATCAGCCAGCTCAAGATCGTCGCCGACGCCGTTGCGGTCAGCGTGGTCGACGCCCTGCACAAGTACCGTGCGGGGGTCTTCGATGAAGAGCGCC TGCAGCAGGAGTTGAGTGGGGCGCTGTCGCGCATCGAGAAGTCGTGGGCCGACTATTCCGCAGACCACCGGACTGCCGCCGAGAAGGAAATCATCGAGTC GCTGGTCCCCACCCTGGAACGGGTCAAGCGGATGACCCTGGCATACGGCGAGCAGGCCAGGGCCGGAAGCCTGCGAAACGTCGAGGCCGGCACGTTCAAT
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MLNKRRLPSMTALQCFEAVARHLSFTRAAEELSLTQSAMSKQVAQLEEQLQHALFRRVRKRLQLTPAGELYLAEVRRILQQVELSTRFLLSYGGETEVLR VATPPTFGARWLIPQLNGWRHRHPNIHLDLRQELEPDDLRQGHCDLAFFFGPGTLPGAECIRLFGEQLVAVCAPSLLPAGGLDEPTQLAGLVLLQNASRA EAWHDWFASLERNCQGCYHGPRFDTFYMCIRAAQAGCGVALLPRFLVEEELAEGKLAIAWPHALPSQEAYYLAYPEHAAEVPKVRHFIEWMVERLEQEQP SAGPRQTRHGPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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