Pseudomonas aeruginosa AZPAE14410, NQ63_RS29000

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.55.50.10 - - - 1 67 3.4E-51
PANTHER PTHR32305 - - - 2 414 2.5E-69
SUPERFAMILY SSF69349 Phage fibre proteins - - 328 487 7.53E-37
SUPERFAMILY SSF69279 Phage tail proteins - - 69 250 4.25E-42
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 250 338 3.92E-34
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 10 390 2.3E-98
Gene3D G3DSA:4.10.220.110 - - - 100 163 3.4E-51
Pfam PF05954 Phage tail baseplate hub (GPD) - - 1 206 1.7E-50
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 241 342 3.9E-44
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 272 339 5.0E-15
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 1 408 0.0
SUPERFAMILY SSF69279 Phage tail proteins - - 1 63 1.87E-22
Gene3D G3DSA:2.30.110.50 - - - 68 208 3.4E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.