Pseudomonas aeruginosa AZPAE14410, NQ63_RS27495

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14410 AZPAE14410_contig_31, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCAGCTCCAGGCTCCATACCGCGAACTGCTGCCGGTAGTCGCGGCGGTACTGCTCGCGATTGGCGAACCACTGGCTGGCCGGCAGTCCGGCCAGTTCCT TGAACAGCTCCGCATCCTTCACCGCGACGAAGTCCACGGCGATCGGCGAGTCGTCGTTGGCGCGCGCGGCGACATCCAGGGTCAGCCGCTGCAACTCGAC CCGCGGCGCGAAGAAATACGAGCAGCCGGCCAGCGCCAGGATCGCCAGCGCCAGGGAGAATTTCCGACATATGGTGAAACATCCGTGCTTCATGGGAGTC CAACGAAAATTTTATTTTGCAAATCCATAGACCTGTTCTAGCGTCTTTTGTAGTTCGTCGCCAGTGACGGACCAGAGGGATCGCCAAGGACAGGTTCTGC GCCGTTTTCCCTGTCATGCCTGTGATCCAGCAAGGGACTGCGATGATCAGGGCATCCCCCGATGCATTGCGCCCCCACCATTGCATCGGAGTCAGCCGCC
DNA Sequence for Gene
>NQ63_RS27495
ATGGCCGAGAGTACGCAGCACAAGCTGGACCGGGTGCGCCCGCCGCGCGTGCAGATCACCTACGACGTCGAGATCGGCAACGCCATCGAGAAGAAGGAAC TGCCCTTGGTGGTCGGTATCCTCGCCGACCTCTCCGGCAAGCCGGATACCCCGCCGGCGAAGCTGGTCGAACGGCGTTTCGTCGACATCGACCGCGACAA CTTCAACGAGATCCTCTCCTCCATCTCTCCCCGCGCCACCCTGCAGGTCGACAACACCATCAGCGGCGACGACAGCAAGCTGAACGTCGAGCTGCGCTTC AACCACATCGAGGACTTCGACCCGGTCAACCTGGTGAAGCAGGTGGTCCCGTTGCGTCGCCTGTTCGAGGCGCGCCAGCGCCTGCGCGACCTGCTGACCA AGCTCGACGGCAACGACGACCTCGACCAGTTGCTGCAGGACGTGGTGGCCAACACCGAAGGCCTGCAGGAAATCAAAGCGGCCCGCCCGGAAGCCGAAGC GGCCCCGGCCGGCGACAGCGAACCCCCGGCCGACCAGCCGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCTCTTCCCGGAGAAGCCGCCATGCCCAAGTCATCCGCCGCCGAACAATCCGGCGAGAGTTCGACCCAGACCCTGTCCCTGCTCGACGAGATCATTGCC AAGGGCCGCATGGCCCACGACGACAGCCAGCAGGACTACGCCCGCGACATGCTCGCGGAATTCGCCACCCAGGTCCTCGACGAGGGCATGGCCGTCGACA AGGACACCGTGGCGATGATCAACGACCGCATCAGCCAGATCGATGCGCTGATCAGCGACCAGCTCAACCAGATCATCCACCACCCCGAGTTGCAGAAGCT GGAAGCCTCCTGGCGTGGCCTGCACCAACTGGTGAGCAACACCGAGACCAGCGCGCGGCTCAAGCTTCGCCTGCTGAACGTCGGCAAGAACGAACTGCAG AACGATCTGGAGAAGGCGGTCGAGTTCGACCAGAGCGCACTGTTCAAGAAGATCTACGAAGAGGAATACGGCACCTTCGGCGGACACCCCTTCAGCCTGC
Amino Acid Sequence
>type VI secretion protein
MAESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPDTPPAKLVERRFVDIDRDNFNEILSSISPRATLQVDNTISGDDSKLNVELRF NHIEDFDPVNLVKQVVPLRRLFEARQRLRDLLTKLDGNDDLDQLLQDVVANTEGLQEIKAARPEAEAAPAGDSEPPADQPA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site