Strain | Pseudomonas aeruginosa strain AZPAE14410 AZPAE14410_contig_29, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTACTTCGGCGTTCCCGCGCTGCTGCCGGAGGCGCTGGTGAGCTGGCTGAACACGCCGCACGAGACGCCCTTGCTCGACTGGCCGTCCTTCGAGTTCCTC GCCGGTGCCTGGGGGCTGACCCTCTATACCTCGGCTTTCATCGCCGAGGAGTTCCGCGCCGGCATCGCCTCGGTACGCCCCGAGCAGCGCGCCGCCGGCC TCGCCCTGGGGCTGACCCAGCGCCAGGTATGGCGCGTGGTGGTGCTGCCGCAGGCCCTGCGCACGGCTCTGCCGCCGCTGCTCGGGCAGTACATGAATGC GCTGAAGAACTCCTCGCTGGCGATGGCCATCGGCCTGGCCGAGCTGTCCTACGCTTCGCGCCAGGTGGAAACCGAGACCTTCAAGACCTTCCAGGCCTTC GGTATCGCCACCCTTCTCTACATCGGCGCCATCGCCCTGATCGAAGCCTTCGGCCAGGCGTTGCAGCAGACCCGCCGCTACCGCCAGGGAGGTGCCTGAG
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DNA Sequence for Gene |
>NQ63_RS26590
ATGGATTTCTCGGTCATCTCGGACAACCTGTCCTACCTGCTGCTCGGCGCCTACCCGGACGGCCCGCTCGGCGGAGCGGCGCTGACCCTGCTGCTGGCGT CGCTCTCCGGACTGGCTTCGGCGGTGCTCGGCCTGGTCCTCGGCGTGGCCCTCGCGGTGCTGCCCGGCAAGCCGCGCCTGCTGCTGGTGGCGCTGCTCGG CTTCTTCCGCGCGATCCCGGTGCTGATGCTGATCTTCTGGACCTACTTCCTGCTGCCGATCGTCTTCCATGTCGACGTACCGGCGCTGGCCACCGTGGTC TGCGCACTGTCGCTGATCGGCGGCGCCTACCTCGCCCACTCGGTGTACGCCGGCATCCACAGCCTCCCCGCCGGGCAGTGGGCGGCCGCCCGCGCGCTCG GACTGCGGCCGTGGCAGGTATTGCGCCTGGTGATCCTGCCGCAGGCGCTGCCGGTGATGCTGCCATCCTTCCTCAACCAGTGGGTGTCGCTGATCAAGGA CACTTCCCTGGCCTACGTGATCGGCGTCGGCGAGCTGTCCTTCGTCGCCACCCAGGTGAGCAACCGGGTGATGGTCCACCCGACGGAGATCTTCCTGTTC GTCGCCCTGCTCTACTTCCTGCTCTGCACCAGCCTCGACCTGGCCGCCGCGTTCCTCGCCCGCCGCCGGCGGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGCGGCCGGTGGCTCAGGCGTCGCCGCGCGCCCGCGCGTAGTCGACCAGGTCGCCGAGGTAATGCGGCGAGGCGCGCAGGACGCCATCGTCCCAGCCG TAGAGCACGCCCAGCGCCGACACCTCCATGGCCCACCAGCCCCAGGCGTAGGGGCCGGTCAGGCGGCGGGTCTTCTTCTGCGCCTTGGGGGAAAGCTGGA AGAACTCCCGGTACTGGCTTTGCAGGTAAGGCGCCAGCGCCTGGGCGTCGCTGCCGTCCGCCTCTTCGAAGAACGCCCGCAACTGCCCGAACGGCCTTGG ATGGAAGGTTTCCTCGCTGGCGGAAGTCAGGCCGAGGGCGGCCGCGCCGAGATAGTCGAGCAGGCGGTCGGTATCGAACTGCAGGACCTCCTCGACCAGC GCCGGGATGAGCTCCTGGGCATCGAGCAGCACGCCCATGGCGAGCAGTTGCAGCGCGAACGGATACTGGCCTGTGCGCGGCGCCAGGGCCGGCGCCGTCT
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Amino Acid Sequence |
>polar amino acid ABC transporter permease
MDFSVISDNLSYLLLGAYPDGPLGGAALTLLLASLSGLASAVLGLVLGVALAVLPGKPRLLLVALLGFFRAIPVLMLIFWTYFLLPIVFHVDVPALATVV CALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQVLRLVILPQALPVMLPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRVMVHPTEIFLF VALLYFLLCTSLDLAAAFLARRRRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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