Strain | Pseudomonas aeruginosa strain AZPAE14410 AZPAE14410_contig_29, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAAGACCACCACCAGCCAGGCCGGGAACAGGATCACCCGCCAGTCGCGTGCCTGTTCGTAGCGCATCTGGCCGGCGACGAAGAAGCTGTGGTGGTCGCCG GTATGGCGCTTGTAGAACATCCGCCCCAGCGGGTGCTTGTGGTGGCCGAGGGACTTGTGGATGCGGTACTCGCCCCAGTTGAAGAACACCAGCGCGGCCG GCACCGTCAGCCATTCCAGCAGGCTCGGCTGCTCGAGCCGGGAGAGGAAGAAGACGATCCAGGCGCCGCCGTAGGCGAGGACGAAGCCGGCGTGCAGCCA GGGGTTGTAGCCGGGCCGGATGGCCGCGCGGTACTGCTGGCGAAAGGGTTGGGGATCGAAGGACATGGTCGGCATCTCGCGTGTGATTGTTATTGGCTGG GCCGCGAACCGGGCCGATCCGCCGGGGCGGAAGGGCTTGCATTCGAGTGTAGCGATGCCAGTCTTATCAGGGTAATGGATAAATAGAATGAGGATTATTC
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DNA Sequence for Gene |
>NQ63_RS26160
ATGAAGCTGAACTTGCAGCAGCTCGACCTCAACCTGCTGCTGGTCTTCGATGCCCTGATGCGCGAACGCAACCTGTCGCGCGCGGCGATCCGCCTGCATC GCAGCCAGCCGGCGGTGAGCAACGCCCTCGCCCGCCTGCGCGAACAGCTCGACCAGCCGCTGTTCCGGCGCACCGCCAAGGGCCTGGAACCCACCGCCGC CGCCCTCGCCCTGTACGTGCCGGTGCGCCAGGCCCTGCATCTGCTGCAGGCCGGCCTTGGCTCCCAGGAAACCTTCGATCCGCACACTGCGCGGACCTTT CGCCTGACGATGAACGACTATGCCCAGTTGCGCCTGCTGCCGGGCCTGGTGACCCGCTTGAAGACCCTGGCCCCGCAGGTGACGCTGGAGGTGCGGCCCG ACGAAGGCGCCTCGATCCCGGCGCAGCTGGCCAGCGGCGAACTCGACCTGGCGATCGACTACCTGTACTTCGACGAGCCTGAGCTGGCCTACCGGCCGGT CGGCGAGGAACGCCTGGTGGTGATCGGCCGCCAGGGCCATCCGGCCTTCCGCGGCGGCCTCGACCGCGCCGCCTACGAGGCCGCGCAGCACGTCTCGATC CTGCCGCGGGTGGGGCGCGGCAGTCCGCTGGAGATCGTCCTCGGCTCGGCCAGGGTGCAGCGCCGGGTGCAATTGCTGGTGCCGCACTACCTGACCATCC CGGCCATCGTCGCCAGCACCGAGCTGCTCGGCACCGTGCCGCGCCGCCTGGCCGAGCGTTTCGCCGGCAGCCATGGTCTGCAACTGGCGGACGTCCCCTT CGAGATGGCCCCGGTGCAGGTCAACCTGATCTGGCATCGCCAGCAGGAAGCGACGCCCGGCCTGCAATGGCTGCGCGAGCAGATCGTGCAGATCGAACAG GGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCGCAGGTTGCGCGCCAGGATCAGTCTTCCGTCACTTTCGATCATTGAGCGAGGCCTTTCCCGCGACCTATGGTGAGGCTGCGCCCCGCTGCCGGTCCC CGGCCGCCCCGGGGATACAGTCCAGCACCCGCCAGAGGAGCCACCGTATGACCAGCCTGCCGCTCGAAGCCAACGCCGCCGCCACCCTCGCCGAATGGCA CGGGCTGATCGCCCGCCGCGACCTCTCCGGGTTGCCGCGCCTGCTGCACCCCGACGCCGTGTTCCGCTCGCCGATGGCGCACAAGCCGTATACCGGCGCA CCGGTGGTCTCGATGATCCTGAATACCGTGCTCACGGTCTTCGAGGATTTCGCCTATCACCGCCAGTTGGCCAGCGCCGACGGCCGCAGCGTGGTGCTGG AGTTCAGCGCGCGGGTCGGCGAACGCGAACTGAAAGGCATCGACATGATCCGCTTCGACGACGACGGCCGGATCGTCGACTTCGAAGTGATGGTCCGCCC
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Amino Acid Sequence |
>LysR family transcriptional regulator
MKLNLQQLDLNLLLVFDALMRERNLSRAAIRLHRSQPAVSNALARLREQLDQPLFRRTAKGLEPTAAALALYVPVRQALHLLQAGLGSQETFDPHTARTF RLTMNDYAQLRLLPGLVTRLKTLAPQVTLEVRPDEGASIPAQLASGELDLAIDYLYFDEPELAYRPVGEERLVVIGRQGHPAFRGGLDRAAYEAAQHVSI LPRVGRGSPLEIVLGSARVQRRVQLLVPHYLTIPAIVASTELLGTVPRRLAERFAGSHGLQLADVPFEMAPVQVNLIWHRQQEATPGLQWLREQIVQIEQ G
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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