Pseudomonas aeruginosa AZPAE14410, NQ63_RS25805
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14410 AZPAE14410_contig_29, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGGCGATCGGTCATCGCCGCCTCGATCTGCAATTGCGGGTAGCGCCGCGTCAGTTCGCGCAGCACCGGCATGATCACGATCCGCCCGAGCGCCTGCGGG GTGGTGATCTTCAGCGGACCGCTCGGCGCGCACTGGCGGTCCACCAGCAACTTCTCGACTTCCTCCAGTTCCGCCAGCAAGGGTGCGCAGCGCTCGTAGA ACAGCTGGCCGTCCGGGGTCAGGCTGACGCTGCGGGTGGTGCGGTGCAGCAGACGCACGCCGAGTTCGGCTTCCAGCCGGCCGATGGCGCGCGACAGGCC GGACTGGGTCAGACCGAGAGAAACGGCGGCCTGGGTGAAGCTACGGGTCTCGGCCACGCGGGCGAGCAACTTGACGGCATTCAGGTCCATGGCGATCTCA TCGATGATTATTTTCATCAGTGAAAGGACGGAGAGGCTATTTATCACGATTCCAGCATGAGAAACACTGGCCGCGCCCAACCCAGACCAGGAGTCCCGCC
|
|
| DNA Sequence for Gene |
>NQ63_RS25805
GTGACGGACCGTGCCGCCCCTTCCAACTGGATGCTCGCCCTGCTCGCCTGCGCGCAACTGATCATCGCCCTCGACGCCACCATCGTGTTCGTCGCCCTGC CGGAAATCAGCCGGGCGCTGGATTTTTCGGCGCAACGCCTGCAATGGGTGGTGAGCGCCTATACGGTGGCCTTCGGCGGCTTCCTCCTGCTCGGCGGGCG CGCCACCGACCTGCTCGGCCGGCGCCGCATGTACGTCCTCGGGCAAAGCCTGTACGCCCTCGCCTCCCTCGCGGGCGGCCTGGCCCAGAGCGAGTTGCCG TTGATCCTCGCCCGCGCCGTGCAGGGCCTGGGTGGCGCGCTGCTGTTCCCGGCGACCTTGGCGCTGATCGGCAATCACTTCGCCGAGGGCCCGGCGCGCA ATCGTGCCCTGGCGATCTGGAGCATCGCCTCGGCGTTCGGCCTGGCCCTCGGCTCGGCGCTCGGCGGCGCGCTCACCGAGCTGTTCGGCTGGGCCTCGAT CTTCCTGGTCAACGTGCCGCTGGCCGGCGCCGCGGCGCTGCTCGCCCTGCGCCTGATCCCGGCCGACGCCCGGCGCCAGCGCGGTCGGCGCTTCGACCTG GCCGGCGCGCTGACGGTCACCGCCGGCGCCACCCTGCTGGTCTTCGCCCTGGTCCAGGGCCCCGAGTCGGGCTGGGATGCGCCCTCGGTACGTTTCGGAC TTTACCTTTCCGTCCCGCTGCTACTGGCGTTCCTCGCCATCGAACACTACAGCCGCGACCCGCTGATGCCGCTGCGCCTGCTGGGCAACCGCAACCTGCA GGTGGCGATGCTGCTGACCGCGATCTTCATGAGCAGCTACGGCGTGCAGTACTACTTCCTGGCCATCTACTTCCAGTCGGTGTACGGCTACAGCGTGTTG CAGACCGGCCTGGCGTTCCTCCCGGCGACTCTGCTCTGCACCCTCGGTATCCGCGTCGCCGAGCGCTTGCTGGCCCGTCACGGGGCACGCGCGACGCTGG TCGCCGGCCTGCTGCTGGGCGCACTCGGGCTCGGCCTGCTGGCAGCGTGCCTGCCGCTGGGGCGCGGCTTCCTGGCGCTGCTGCCGGCCATCGTGATCCT CAGCGTCGGCCAGGGCATGACCTGGACCGCCATGTGGGTGAGCGCCGCCAGCGGCGTCGATCCCGCCGAACAGGGCGTCGCCTCGGGGATGGCCTCGATG ACCCAGCAGATCGGCGGCGCGCTCGGCCTGGCCCTGCTGGTGGCGCTGGCCAACGCCCAGGTGCGCGGCGCCGATGCCGCCAGCCTGCTGGCCAGCCAGG CGCGCGGCATCGAATGGGTGACCGCGCTCAGCGCCCTGCTCGCCCTGTTCGGCGCCGCCCTGGCCTTGCGGCTGCGCCGTGAGGAACCCGCGGCGTTGCA GCCGAGTCGCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCCCGCTCAGGCGTCGCCCAGCTCGGCGCCGAGTTCCAGCGCCAGGGCCTGGAAGGCCAGGCGCGCGGCACCGGGGTGGCTGCCCTGGCGCCAGAACAGC GCTACCTGGCGGGTCGGCAACGCCGGCCGCAGCGCCACGCAGCGCAACCCGGCCTGCTGGCGCGCCACCGCCTCCGGCAGGATGCTGGCCAGTCTTCCGC GGCGAACCACGTCGACGATGGCGCTGATCGAGTTCGCCTCCAGCGCCACCCGCGCCGTCACCCCTTGCTGGCGCAGGTAAGCGTCGATGTGCCGGCGCGT GGCGAAGTCGTCGCGCAACAACGCCAACGGCAACTCCGCCAGCGCTGCGGCGGCCAGCGGCGCGTCCGCCGCCGGGTGTTCCGCCCCCAGCACCAGGCCC AGGCGCTCCAGGTAGAGCGGCTGGCTGTCGATCTCCACCGAACCCGGCTCGCTGAAGGCCACGCCAAGGTCCAGGCGATCGTCGATCAGCGCCGCCTCCA
|
|
| Amino Acid Sequence |
>MFS transporter
MTDRAAPSNWMLALLACAQLIIALDATIVFVALPEISRALDFSAQRLQWVVSAYTVAFGGFLLLGGRATDLLGRRRMYVLGQSLYALASLAGGLAQSELP LILARAVQGLGGALLFPATLALIGNHFAEGPARNRALAIWSIASAFGLALGSALGGALTELFGWASIFLVNVPLAGAAALLALRLIPADARRQRGRRFDL AGALTVTAGATLLVFALVQGPESGWDAPSVRFGLYLSVPLLLAFLAIEHYSRDPLMPLRLLGNRNLQVAMLLTAIFMSSYGVQYYFLAIYFQSVYGYSVL QTGLAFLPATLLCTLGIRVAERLLARHGARATLVAGLLLGALGLGLLAACLPLGRGFLALLPAIVILSVGQGMTWTAMWVSAASGVDPAEQGVASGMASM TQQIGGALGLALLVALANAQVRGADAASLLASQARGIEWVTALSALLALFGAALALRLRREEPAALQPSRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|