Strain | Pseudomonas aeruginosa strain AZPAE14410 AZPAE14410_contig_22, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCGCTGCTCTACGGCGAAATGGCCAAGGCCAAGAAGCCGGACGACTGGGTCGTCGGCGGCACCCCGCAGTCCTTCGAAATCTACGGCTGCATGGTGCGC AAGGGCGACGCGGCGTTCAAGAAAGTGGTCGACAAGGCCATCACCGATACCTACGCCTCCGGCGAGGTCAACAAGATCTACGACAAGTGGTTCACCCAGC CGATCCCGCCGAAGGGCCTGAACCTCAACTTCCCCATGAGCGAAGAGCTGAAGAAGCTGATCGCCAGCCCGACCGACAAGGCCGCCGAGCAGATGTAACG AGCGCCTGGCGTTCCTCCCGGAGCGCCAGCGCTTCGCGCGTCGCCCCCGCCTCGCAGCGGGGCCTCGGGGACGCGGGAGGGGCCTGCCCCTCCCCAGCCG TCTCCCCCGGAAGAGCAGCGCCGCCGGCCCGCACGGCCGCGCCGGCGCCTGCCTTCCCCGCCAGTGTCTGCAACCGATTGAACCGAGGGGAAACCCCAAC
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DNA Sequence for Gene |
>NQ63_RS24495
ATGAATTACAACTGGGACTGGGGCGTGTTCTTCAAGTCCACCGGGATCGGCAGCGAAACCTACCTCGACTGGTACATCGCCGGTCTGGGCTGGACCATCG CCATCGCCCTGGTCGGCTGGATCATCGCCCTGGCGCTGGGCTCGCTGCTCGGCGTCATGCGCACCGTGCCGAACCGCCTGGTATCGGGGATCGCCACCAC CTACGTGGAAATCTTCCGCAACGTGCCGCTGCTGGTGCAGCTATTCATCTGGTACTTCCTGGTACCCGACCTGCTGCCCGAGGGCCTGCAGACCTGGTTC AAGCAGGACCTCAACCCGACTACCTCGGCCTACCTCAGCGTGGTCGTCTGCCTCGGCCTGTTCACCGCCGCGCGGGTCTGCGAGCAGGTGCGCACCGGCA TCCAGGCGCTGCCCTACGGGCAGACCTCGGCGGCCCGCGCGATGGGCTTCCGCCTGCCGCAGATCTACCGCCACGTGCTGCTGCCGCAGGCCTTCCGGAT CATCATCCCGCCGCTGACCTCGGAGTTCCTCAACATCTTCAAGAACTCCTCGGTGGCGTCGCTGATCGGCCTGATGGAGCTGCTGGCGCAGACCAAGCAG ACCGCCGAGTTCTCCGCCAACCTGTTCGAGGCCTTCACCCTGGCCACGCTGATCTACTTCACGCTGAACATGAGCCTGATGCTGATCATGCGCCTGGTGG AGAGAAAGGTCGCCGTACCGGGCCTGATCTCCGTAGGAGGTAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGGACTTCAGTGGAATCGTTCCCGCCCTGCCGAGCCTCTGGGAAGGCATGCTGATGACCCTCAAGCTGATGGTCCTCGGCGTCCTCGGCGGCGTCGCGCT GGGTACCGTGCTGGCGCTGATGCGGCTGTCGCACAGCAAGTTGCTGTCGAACATCGCCGGCTTCTACGTCAACTACTTCCGCTCGATCCCGCTGCTGCTG GTGATCACCTGGTTCTACTTCGCGGTGCCCTTCATCCTGCGCTGGATCACCGGCGAGGACACCCCGGTGGGGGCGTTCACCTCCTGCCTGGTGGCCTTCA TGATGTTCGAGGCGGCCTACTACTGCGAGATCGTCCGCGCCGGCATCCAGGCCATCCCGAAAGGCCAGATGGGCGCCGCCCAGGCACTGGGCATGACCTA CGGGCAGACCATGCGCCTGGTGATCCTGCCGCAGGCGTTCCGCAAGATGACCCCGCTGCTGCTGCAACAGAGCATCATCCTGTTCCAGGACACCTCGCTG
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Amino Acid Sequence |
>amino acid ABC transporter permease
MNYNWDWGVFFKSTGIGSETYLDWYIAGLGWTIAIALVGWIIALALGSLLGVMRTVPNRLVSGIATTYVEIFRNVPLLVQLFIWYFLVPDLLPEGLQTWF KQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMELLAQTKQ TAEFSANLFEAFTLATLIYFTLNMSLMLIMRLVERKVAVPGLISVGGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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