Strain | Pseudomonas aeruginosa strain AZPAE14410 AZPAE14410_contig_12, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCCAGCTCCAACAAACCATCCGCCATGGCCGCCAGGGCCAGATGCCGGCCCAGGAGCCATACCTGGGCAAGGAAAAGGTGCACATCCTGGCCGCCTAC ATCTACAACCTGTCGCACAACCAGGGCAGCAACTGACCCCTCCCCCCACCCGCGCCCTCCCGGGCGCGGGTCCTTCCCCCGGTCTCAGACCTTAGTCCCA GGCGGCGCGACGAAGTGTCGCACCAGCGGACGCCTTTCCTACCCTTCCTTTTCAATCGCGTCTAAGCTGCTCTGCATTCGTCCCTCTCCGGCAGAGCGAC GGGACACCTAACTTCACCGGCCGAACCCACTCGTCCGGATAGCGCCAGAAAGCCATACGGCCGCCTTGGAAAGCGCTCTGAAGCAGGCATCAAACTGGCG TCGCCCCTGGCCTGGCGCGTTGCAATGCCCACCCGCTTTCTCCATACTTGCCGCCGATTTTTTGTCCCTAAAAAAGTCCATTAACCGTGGAACCCCTAGC
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DNA Sequence for Gene |
>NQ63_RS13855
ATGAGCACAGCAATCAGTCAGACTGCTTATAACTATAAGGTGGTCCGCCAGTTCGCCGTTATGACGGTGGTCTGGGGGGTCATTGGAATGGGTCTCGGTG TCCTGATCGCCGCCCAACTGGTATGGCCCGAATTGAACTTCGACCTGCCGTGGACGAGCTTCGGCCGCCTTCGCCCCCTGCACACCAACGCGGTGATCTT CGCCTTCGGTGGGTGCGCCCTCTTCGCCACCTCGTACTACGTGGTGCAACGTACCTCGCAAGCCCGACTGATTTCAGACACGCTGGCGGCCTTCACCTTC TGGGGTTGGCAGGCCGTGATCGTGGGCGCCGTGCTGACCCTGCCGCAGGGTTTCACCACCTCCAAGGAATACGCCGAACTGGAATGGCCGCTGGCCATCC TCCTGGCGATCGTCTGGATCACCTACGCGATCGTGTTCTTCGGCACCATCGTCAAGCGCAAGGTCAAGCACATCTATGTGGGCAACTGGTTCTACGGTGC CTTCATCCTGGTGACGGCGATGCTGCATATCGTCAACCACATGTCGCTGCCGGTGAGCTGGTTCAAGTCCTACTCCGCCTACTCCGGCGCCACCGATGCG ATGGTCCAGTGGTGGTACGGGCACAACGCCGTGGGCTTCTTCCTGACCACCGGCTTCCTCGGCATGATGTACTACTTCGTGCCCAAGCAGGCCGAGCGTC CGGTCTATTCCTATCGCCTGTCCATCGTCCACTTCTGGGCGCTGATCTCCCTGTACATCTGGGCCGGCCCGCACCACCTGCACTACACCGCGCTGCCGGA CTGGGCGCAGTCGCTGGGCATGGTGATGTCGCTGATCCTCCTGGCACCGAGCTGGGGCGGCATGATCAACGGCATGATGACCCTCTCCGGCGCCTGGCAT AAGCTGCGCACCGACCCGATCCTGCGCTTCCTGGTGGTGTCCCTGGCCTTCTACGGCATGTCCACCTTCGAAGGCCCGATGATGGCGATCAAGACCGTCA ACGCCCTCTCCCACTACACCGACTGGACCATCGGCCACGTGCACGCCGGCGCCCTCGGCTGGGTGGCGATGATCTCCATCGGCTCGCTCTACCACCTGAT CCCGAAAGTCTTCGGTCGCCCGCAGATGCACAGCATCGGCCTGATCAACGCGCACTTCTGGCTGGCCACCATCGGCACCGTGCTGTACATCGCCTCGATG TGGGTCAACGGCATCACCCAGGGCCTGATGTGGCGCGCGGTCAACGAGGACGGCACCCTGACCTACTCCTTCGTTGAAGCACTGGTCGCAAGCCACCCGG GCTTCATCGTGCGCATGATCGGCGGTGGTTTCTTCCTCACCGGCATGCTGCTGATGGCCTACAACACCTGGCGCACCGTGCGTGCTGCCAAGCCGGCCGA ATACGAAGCCGCCGCGCAGATCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGCCCGACGTAAATGAAGAACCACGAAATACTCGAGAAGAACGTCGGCCTGCTGGCCATCTTCATGGTGATCGCCGTCAGCATCGGCGGCCTGACCCA GATCGTTCCGCTGTTCTTCCAGGACGTGACCAATACCCCGGTCGAAGGCATGAAGCCGCGTACCGCCCTGGAACTGGAAGGTCGCGACATCTACATCCGC GAAGGCTGCGTCGGCTGCCACTCGCAGATGGTCCGTCCGTTCCGTGCCGAGACCGAACGCTACGGCCATTACTCGGTCGCCGGTGAAAGCGTCTGGGACC ACCCGTTCCTGTGGGGTTCCAAGCGTACCGGCCCGGACCTGGCCCGCGTCGGCGGCCGTTACTCCGACGACTGGCACCGCGCGCACCTGTACAACCCGCG CAACGTGGTGCCCGAGTCGAAGATGCCTGCCTACCCGTGGCTGGTAGAGAACAAGCTTGATGGCAAGGACACCGCCACCAAGATGGAAGTCCTGCGCAAG
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Amino Acid Sequence |
>cytochrome oxidase subunit I
MSTAISQTAYNYKVVRQFAVMTVVWGVIGMGLGVLIAAQLVWPELNFDLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYVVQRTSQARLISDTLAAFTF WGWQAVIVGAVLTLPQGFTTSKEYAELEWPLAILLAIVWITYAIVFFGTIVKRKVKHIYVGNWFYGAFILVTAMLHIVNHMSLPVSWFKSYSAYSGATDA MVQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPVYSYRLSIVHFWALISLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWH KLRTDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGSLYHLIPKVFGRPQMHSIGLINAHFWLATIGTVLYIASM WVNGITQGLMWRAVNEDGTLTYSFVEALVASHPGFIVRMIGGGFFLTGMLLMAYNTWRTVRAAKPAEYEAAAQIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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