Pseudomonas aeruginosa AZPAE14410, NQ63_RS13735
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14410 AZPAE14410_contig_12, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGAGTACTGCACGTTGTCGAGCAGCTCGCGGGTATCCTCGACCTTGGTCCGGCTCGCGGCGTCCACTTCGATCAGGTCGACGAAGCGGCCTTCGTCGA TTTCGCGACAGACCGAGCATTCGCCGCACGGCGTAGAGCTGACCCCGGTCTCGCAGTTCAGGCACTTGGCCAGGATCCGCGCGATGGTGGTCTTGCCGAC CCCGCGGGTACCGGTGAACAGGTAGGCATGGTGCAGCCGCTGGTTGTCCAGGGCGTTGATCAGAGCCTTGAGCACATGGGTCTGGCCGACCATTTCACGG AAGGAACGGGGACGCCATTTACGCGCAAGAACTTGATAACTCATCGAAAACCGTCGCAGAAGGGAAGCACAAGTCGGCCAATGCTAGCGCAATTTACCCC TTCTGCGCTCGCCGACTTGGCAAACTGCGTGCTAAGAATTCCCCTGGCCCTTCAGCAGCCCTCGTCGGTGGCAATGACTCTACCTTCCCTGACATCGTTC
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| DNA Sequence for Gene |
>NQ63_RS13735
ATGCCTCATTTCGGCGCACCTGCGCTGCTCCTGCTGCAGTTGCTCGCGGCCCTTCCAGCGACGGCCGTGGAGACCGACGCGACGCCATTGCGCTTCTCGG TGATGGAAAGCTGGAGCATGCCGTTGGTCCGCCTGCAACGGGGCCAGCCGATCGACGGCATCGTCTACGACATCACCCGCTCCCTTGCCCGGCAGGTCGG CCGCAAGGCGCTCTACCACCCCTACCCGCGCGGGCGCATCGAGCAGGCGATGAACGCTGGCGAAATCGATGTCCGCTGCTACATCAGCCCCGCCTGGCTC AGCCACGACTTCCCCGGCTATCGCTGGAGCGTCGCGCTGCTGGTGCAACGCGACATCCTGGTCGCCCGCGAAGGCTTCGCGCCGATTCCCGAGGCGCTGC CGGCCCAGCGTATCGGTACCGTCCTTGGCTACAGCTATCCCCGCTTGCAAGCGCTGTTCGACATCGGCCGACTGCGCCGCGACGATGCGCGCACCCAGGA TCTGGTGCTGGAAAAGCTGCGCGCCGGCCGCTACCGCTACGCGGTCAGCCATCAACTGTCGCTGCACTGGAGCAACCGCCAGGCGCCGGGGCAGCCGCCA CTCCAGGAAGCCGCGCAGCTCGAAGAGACGGCGGTGAGCTGCATGGTGCGGGACTCCGCAGAGGTTCCGGTGGAAGCGATACTGAAGACGTTCGAGGAAA TGAAGCGCAGCGGAGAGATCGAGGAGATACTGCAGCGCTACCGATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAACGGCGGCGGCGTGCGGAAAATGGCGGGCCTGAAATGGAGGCGGCCCCGCCAGCCACACCCCGGCACACGATGTTCCCGCTGTGGCTGCTTCCTTCCG GACCTGACCAGGTTGACGGGTAATCGTTGCGGGGGGACCGACAGGGCCACCATTGCAGCCTACCCTCGGGTAGGCCGCGCCATTCTACCGGCTTGCGCGT AAGTTACAACCACTTCAAGCACTTACGTTTGCAATCCATTTCGCGAAAGCGGTTCATTGCTGCTGGATCAGACCCTCCGGCGGCGGCTGGGTCGATACGC TCAGCTCGGTATCGACATACAGGTCCAGGGTGCCCCAGCCCGGCTTGGTGCTGAACGACGCATACTTCTCCTCACCGCGATGGAAGGAGAAGGCGATCCG GTAATCGCTGCCGCCGAACAGCTTCACCGGAAACTCGCGGACTTGGCCGGGCCGGATCTCCCCGGAGAAGGTTTCCACGCCCTGCTCCTTGTAGCTGTAG
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| Amino Acid Sequence |
>amino acid ABC transporter substrate-binding protein
MPHFGAPALLLLQLLAALPATAVETDATPLRFSVMESWSMPLVRLQRGQPIDGIVYDITRSLARQVGRKALYHPYPRGRIEQAMNAGEIDVRCYISPAWL SHDFPGYRWSVALLVQRDILVAREGFAPIPEALPAQRIGTVLGYSYPRLQALFDIGRLRRDDARTQDLVLEKLRAGRYRYAVSHQLSLHWSNRQAPGQPP LQEAAQLEETAVSCMVRDSAEVPVEAILKTFEEMKRSGEIEEILQRYR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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