Pseudomonas aeruginosa AZPAE14404, NQ62_RS11355
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14404 AZPAE14404_contig_7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCGGACCTTCATGGACCGCGACGTGGCCCCACTGCTGGCGCCGGTACCGGGGATCGACCTGGAGCGCTACAAGGACAGCCTGGTCGAGCGCTTCGCCA ACCGCGCCATCGCCGACCAACTGGAACGGGTCTGCTCGGACGGCTCGTCGAAGTTTCCCAAGTTCATCGTCCCCACCGCCAATCGGCTGATCGCCGCCGG CCGGCCGCTGGAACGGGTGGCCCTGGTGGTGGCGGCCTGGGCGCTGTACCTGGGCGGGGTCGACGAGCATGGCGAGCACTACCCGATTCCCGATCCGCGC GCCGCCGAATGCCAGGCGCTGGTTGCCGAACGCCACGGCCTGGGCCGGCGCCTGCTCGGCGTGGAGACCGTGTTCGGCCCGGCGATCCCGGCCTCGGCGG CCTTCGTCGAGGCCTTCGAGCGGCTCTACGACAGCCTGCGCCGACACGGCGTCAGCGAAACCCTGCGCCAGGTACTCGGCGAATGACTCCGGAGGGCCGC
|
|
| DNA Sequence for Gene |
>NQ62_RS11355
ATGCACGGATTGTTCCTCGGCATCGATTGCGGCACCCAAGGCAGCAAGGCGCTGCTGCTCGACGCCGGCAGCGGCTGCACGCTGGGCCTGGGCAGCGCCG CGCAGCGCCCGCCGGAAGGCCGCGACGGACGCCGCGAGCAGGACCCGGCGGACTGGCTGGAAGCCATGGCCAGCGCGGTACGCATGGCCCTGGAAGAAGC CGCGGTGGACGGCCGCGAGGTCCGCGCCCTGGCGGTTTCCGCCCAGCAGCATGGGCTGCTCCTGCTCGACGCCGAGGGCCGGGCGCTGCGCCCGGCCAAG CTCTGGTGCGACACCGAGAGCGTGGCGGAGAACCGCGAGCTGCTGGAAGCCCTCGGCGGCCCGGCCGGCTCGCTGGAACGCCTGGGGCTGGTGCTCGCGC CGGGCTACACACTGTCCAAGCTGCTCTGGAGCAGGCGCCGCTTTCCCGAGCTGTTCGCCCGCGTCGCGCACATCCTCCTGCCCCACGACTACCTCAACCA CTGGCTCACCGGCCGCGTCTGCAGCGAAGCGGGCGACGCCTCCGGTAGCGGCTACTTCGACGTGCGCCGGCGCACCTGGGCCAGCGACGTGCTGGAGCTG GTCGAGCCGGGCGGACGCCTGGCGGCAGCGCTGCCGGAGCTGATCGAGCCCGGCGCCTGCATCGGCAACCTGCGCCCCGAAGCGGCCGCCGCCCTTGGCC TGGCTCCCCACACGCGGGTCGCCGGCGGCGGCGGCGACAACATGCTCGCCGCCATCGGCACCGGCAACATCCGCCCCGGCCTGCTCACCGCCAGCCTGGG CACCTCCGGCACCCTGGCCGCCTATGCCGAGCGGCCGCTGGTCAGTCCGCACGGCGAGCTGGCGACCTTCTGCGCCTCGTCCGGCGGCTGGCTGCCGCTG GCCTGCACGATGAACCTCACCGGCGCTTGCGGCCTGGTACAGGACCTGCTGCACCTCGATCTAGACGAATTCTCCCGGCTGGCCGCCCAGGCGCCGGTCG GCGCCGAAGGTCTGCTGATGCTGCCGTTCTTCGACGGCGAGCGGGTTCCGGCGCTACCGCACGCCAGCGCCAGCCTGCATGGCATGACCGCGGCCAACCT GAGCCGCGCCAATCTTTGCCGGGCGGTGCTCGAAGGCACCGCCTTCGGCCTGCGCTACGGCCTCGACCTGCTGCGCGCCAGCGGCCTGCCGGGCGAGGAA ATCCGCCTGGTCGGCGGCGCGGCGAAGAGCCCGCTGTGGCGGCGGACGCTCGCCGACCTGCTCGGCCTGCCGCTGGTCTGTCCACGGCAGACCGAGGCCG CCGCCCTTGGCGCGGCGCTCCAGGCGGCCTGGAGCCTGGGCCGCGAAAGCGGCGCCGGTGAAAGCCTGGAAGCCCTGTGCCGGCGCTGCGTGGCGCTCGA CGAGGCGACCCGCACCCAGCCCCAGGCGCGACGACAGGCAGCCTACGAACAGGCCTACCGGCGTTACCTGGAGCACCTGCCTCCGCGATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGGCCGGCTTTCCTTCCTCTTCTGGCGTTTTGGAGATCTGCATGTACCTGGTGTGTGGCGAGGCCCTTTTCGATGTCTTCAGCCTGGAAAGCGCTGCGCG CAGCAACGAGCTGGGCTTCACCGCGATCGCCGGCGGCTCGCCGTTCAACGTCGCCGTCGGCCTGCGCCGGCTGGGCGTAGAGGTGGCGCTGTTCGGCGGG CTGTCCAGCGACTACCTGGGCGCGCGGCTGCGCCGGGTGCTCGAAGAAGAAGGCGTGGACTGCGGCTTCCTGGTGCCCAGCGACGCCCCGACCACCCTGG CGATGGTCGGCCTCGACGCCAGCGGCTCGGCGCAATACCAGTTCCGCGGCGAGGGCTGCGCCGACCGCCAGGTGCGCCTGGAACACCTGCCGACGCTGGA TGGGCGGATACGCGGGCTGCACGTCGGCTCCTACACCCTGGTGGTGACGCCGGTGGCCGACACCCTGCTGGCGCTGGTCCGGCGCGAGAGCGGCCGGCGC
|
|
| Amino Acid Sequence |
>xylulose kinase
MHGLFLGIDCGTQGSKALLLDAGSGCTLGLGSAAQRPPEGRDGRREQDPADWLEAMASAVRMALEEAAVDGREVRALAVSAQQHGLLLLDAEGRALRPAK LWCDTESVAENRELLEALGGPAGSLERLGLVLAPGYTLSKLLWSRRRFPELFARVAHILLPHDYLNHWLTGRVCSEAGDASGSGYFDVRRRTWASDVLEL VEPGGRLAAALPELIEPGACIGNLRPEAAAALGLAPHTRVAGGGGDNMLAAIGTGNIRPGLLTASLGTSGTLAAYAERPLVSPHGELATFCASSGGWLPL ACTMNLTGACGLVQDLLHLDLDEFSRLAAQAPVGAEGLLMLPFFDGERVPALPHASASLHGMTAANLSRANLCRAVLEGTAFGLRYGLDLLRASGLPGEE IRLVGGAAKSPLWRRTLADLLGLPLVCPRQTEAAALGAALQAAWSLGRESGAGESLEALCRRCVALDEATRTQPQARRQAAYEQAYRRYLEHLPPR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|