Strain | Pseudomonas aeruginosa strain AZPAE14404 AZPAE14404_contig_5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAGGCCGAGGTCATCGCCATGTCCAACGATACCGAGTTCGGCCTGGCGTCCTACTTCTACGCCCGCGACCTGGCCCGCGTGTTCCGCGTCGCCGAGCAA CTGGAGTACGGCATGGTCGGCATCAACACCGGCCTGATCTCCAACGAAGTGGCGCCGTTCGGCGGCATCAAGGCCTCGGGCCTGGGCCGCGAAGGCTCCA AGTACGGGATCGAGGACTACCTCGAGATCAAGTACCTCTGCCTGGGCGGTATCTGAGTCCGGCGAGAAACGCATCCGGAGGGGCCGGACGGCAGGCAAGA GCTGCGCCGTCCGGTGTCGACGTTGCCGGTGGTGGCACCGGACGAACCGGGAGTCGCGGTCGCCGATCGCGAAGCGGCTCCGAGCCCTGGCGGGCCTGCA AGTCCCGAGGCAGTCGATCATCGCATGCTGCCTTGGGGAGCTTCCTTCCCGCCTTCATCCTTTGACCCGGCCGACCCGATGAGCGGCCACTGAGGAAGCC
|
|
DNA Sequence for Gene |
>NQ62_RS10255
ATGAGCAAGACCAACGAATCCCTGCTGAAGCGTCGCCAGGCCGCGGTACCCCGCGGCGTGGGCCAGATCCACCCGGTCGTCGCCGAGCGCGCCGAGAACT CCACCGTCTGGGACGTGGAAGGCCGCGAGTACATCGACTTCGCCGGCGGCATCGCCGTGCTGAACACCGGCCACCTGCATCCGAAGGTGATCGCCGCGGT CCAGGAGCAACTGGGCAAGCTGTCCCACACCTGCTTCCAGGTGCTGGCCTACGAACCCTACATCGAGCTGGCCGAGGAAATCGCCAAGCGCGTGCCGGGC GACTTCCCGAAGAAGACCCTGCTGGTCACCTCCGGCTCCGAAGCCGTGGAGAACGCCGTCAAGATCGCCCGCGCCGCCACCGGCCGCGCTGGCGTGATCG CCTTCACCGGCGCGTACCACGGCCGCACCATGATGACCCTGGGCCTGACCGGCAAGGTGGTCCCGTACTCCGCCGGCATGGGCCTGATGCCGGGCGGCAT CTTCCGCGCCCTGGCGCCCTGCGAGCTGCACGGCGTGAGCGAGGACGACTCCATCGCCAGCATCGAGCGCATCTTCAAGAACGATGCCCAGCCCCAGGAC ATCGCCGCGATCATCATCGAGCCGGTGCAGGGCGAGGGTGGCTTCTACGTCAACTCCAAGTCCTTCATGCAGCGCCTGCGCGCCCTGTGCGACCAGCACG GCATCCTGCTGATCGCCGACGAAGTGCAGACCGGCGCCGGCCGTACCGGCACCTTCTTCGCTACCGAGCAACTGGGCATCGTTCCTGACCTGACCACCTT CGCCAAGTCGGTCGGCGGCGGCTTCCCGATCTCCGGCGTGGCCGGCAAGGCCGAGATCATGGACGCCATCGCGCCCGGCGGCCTGGGCGGCACCTATGCC GGCAGCCCGATCGCCTGCGCCGCGGCCCTGGCCGTGCTGAAGGTGTTCGAGGAAGAGAAGCTGCTGGAACGTTCGCAAGCCCTCGGCGAGCGCCTCAAGG CCGGCCTGCGCGAGATCCAGGCCAAGCACAAGGTGATCGGCGACGTTCGTGGCCTGGGTTCGATGGTGGCCATCGAGCTGTTCGAGGGCGGCGATACCCA CAAGCCGGCCGCCGAGCTGGTCAGCAAGATCGTCGTCCGTGCGCGCGAGAAGGGCCTGATCCTGCTCTCCTGCGGCACCTACTACAACGTCATCCGCTTC CTCATGCCCGTCACCATCCCCGACGCGCAACTGGAGAAGGGCCTGGCCATCCTGGCCGAGTGCTTCGACGAACTCGCTTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCTTCACCGGCAAAGCGATACCCCCCGAGGCCCGCGCGTCCGCGCGGGCCTTTCTTTCAGAGGCTTCACGGAAACGGAAGCCTCTTTTTTCTGCCAGGGT TTTCCGCGAAACGCCCGACGAACGGTTTTCCCCTGTTACCCTTGGGCGCCTGGCGCATACGAATCCTCCCGCATTCCTCCGGTCGTACCGTTCGAGGCGA TTAGGACAGGTCCTAGAGGCGCACCGTGTTCGTCCGTCATACCCTTGTGTGCCCGCGGGCCGTGTCGTGCCCGCCTGTCATGCCTGGTGCGTCCCGCTCG GTTCGCCAGGTTCGAAGAGGAACGCCATGAGTGCCGCGAAAAAGGCCCCCGTCATCCTGATTGCCGACCCGGACCCCTGGAGTCGCGACTTGCTTGGCCA ACTGGTCCTCGGCGTGCGTTGCGATGCCCGGCTGGTCCTCTGCGGCGATGGCGGAGAAGCGCTGGCGCATTGCCGGCGCCGGCGCTTCGCGTTGATCCTG
|
|
Amino Acid Sequence |
>4-aminobutyrate aminotransferase
MSKTNESLLKRRQAAVPRGVGQIHPVVAERAENSTVWDVEGREYIDFAGGIAVLNTGHLHPKVIAAVQEQLGKLSHTCFQVLAYEPYIELAEEIAKRVPG DFPKKTLLVTSGSEAVENAVKIARAATGRAGVIAFTGAYHGRTMMTLGLTGKVVPYSAGMGLMPGGIFRALAPCELHGVSEDDSIASIERIFKNDAQPQD IAAIIIEPVQGEGGFYVNSKSFMQRLRALCDQHGILLIADEVQTGAGRTGTFFATEQLGIVPDLTTFAKSVGGGFPISGVAGKAEIMDAIAPGGLGGTYA GSPIACAAALAVLKVFEEEKLLERSQALGERLKAGLREIQAKHKVIGDVRGLGSMVAIELFEGGDTHKPAAELVSKIVVRAREKGLILLSCGTYYNVIRF LMPVTIPDAQLEKGLAILAECFDELA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|