Strain | Pseudomonas aeruginosa strain AZPAE14404 AZPAE14404_contig_5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCAGCAACAGCGAATTCGTGGGTAGCCTGTACCGGGACCACCGCGGCTGGCTGCTTGCCTGGCTGAACCGCAACCTCGGCTGCCGCCAGCGCGCCGAAG ACCTCAGCCAGGACACCTTCGTTCGCCTTCTCGGCCGCCCGGAGCTGCCCGGCCTGCGCGAACCACGCGCGTTCCTGGCGAAGGTGGCGCGCGGCCTGAT GATCGACCACTTCCGCCGCGCCGCCCTTGAGCAGGCCTATCTCGTCGAACTGGCGCTGGTTCCGGAAGCGGAGCAGCCTTCGGCCGAAGAGCAGTACCTG ATTCTCGAGGACCTCCGCGAGATCGATCGCCTGCTTGGCACGCTGTCGCTGAAGGCGCGCAGCGCGTTTCTCTATAGCCGCCTGGACGGCATGCCCCACG CGGAGATCGCCGAGCGTCTCGGAGTCTCGGTGCCGCGCGTGCGCCAATACCTGGCCCAGGGCCTGCGCCAGTGCTACATCGCCCTCTACGGAGAGCCCCG
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DNA Sequence for Gene |
>NQ62_RS09205
GTGAGCGCCGACGATCGTCATTCGCCGGTACGCGCGCGGGTGCTCGACGAAGCCATCGCCTGGCAATTGCTGCTCGACTCCGGCGAAGCCCATCCCGACG ATCACCGCGCCTTCCACCGCTGGTACGCGGCGCATCCCGAACACGAACGCGCCTGGGAACAGCTCGGCGGCCTCGACCGGCACCTGGCGAGAGCCGCCAA CGGGCCGGCACGCAACGCCCTGCTGTCCGGCAACGCACGCTTCAAGCGCCGCCTGCGCCGGCTCGGCAGCAGCGCCCTGGGGCTAGTGCTGGCGCTGGGC GTCGGGCTCGGCGTGGCCAACCGCTACGTCCCGGTCCGCTACCTGCTGGCCGACGCCTACAGCGCCACCGGCGAGCAGCGCGAGCTGACCCTCCCGGATG CCACCCATGTGCGCCTGAACAGCCGCAGCGCCATCGACGTCCGCTTCGACGGCGAACGCCGCCAGGTCGTGCTACTGGCCGGCGAGATCCTGGTGGAAAC CGCCCATGGCGACCCGCGCCCCTTCGTGGTCAGCAGCGCCGATGGCGACATGCGCGCCCTCGGCACGCGCTTCCTGGTGCGCCGCGAGGAACCCGGCACG CGCCTCACCGTGTTGCAGTCGGCGGTGGCCGCGCGCGCGGAAACGCTCAGCGAAGAGCGTGTGATCAAGGAAGGCCAGCAGGTGCTGATCCTGCCGCAAG GCCTGCAGGCCAGCGAAGCGGCCCCGGCCCTGGCCGGCGCCTGGGCACAAGGCATGCTGGTGGTGGAGAACGCCCGGCTGGCCGACCTGGTGGCGGAACT GGGGCGCTATTCGCCGGCGCTGCTGCGGGTCGACCCGAGCATCGCCGACCTGCGCGTCACCGGCAGTTTCCCGCTGAAGGACACCCGCCTCGCCCTTCAG GCTTTGGAGCCGAGCCTGCCGGTGCGCAGCGTGAGGCACAACGCCTGGTGGTTCGAAGTGGTGCCACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCGAACGGGCTGGCGAAAAATTTTTCCCGCCGGCCCTATCACTTTTTCCGACTCGTCCGGCAAGGAGGCATTGAGACTCGTTTCCATCCAGGAGCCCCG CACATGCCCCGCCCGACGTTCCGTCCCGGCCTGCTCGCCCTAGCCATCGCCCTCGCCGTTCCCGCACCGTTCCTCCACGCCGCCCCGGCCGAACAGGCCA GCGTGCGCGACTACCGCATCGCCGCCGGGCCGCTGGCAGGCACCCTGAACCGCATCGCGGCCCAGGCCGGCCTGGTCCTCACCCTGGACCCGGCGCTCGC CGAAGGACGCAGCGCCCACGCCGTACAAGGTCGCTTCGACGCGCCCGGCGCATTGCGCGAAGCGCTCAAGGGCAGCGGCCTGGAACTGGTGGAAAATGCC GGCGGCACCTACAGCCTGCGCAAGGTGCCGGAAGACACCCTGTCGTTGCAGGCGATGACGGTCAGCGGCGCCGAGGAAGACCCACTGGGGCCGACCAGCG
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Amino Acid Sequence |
>amino acid ABC transporter substrate-binding protein
MSADDRHSPVRARVLDEAIAWQLLLDSGEAHPDDHRAFHRWYAAHPEHERAWEQLGGLDRHLARAANGPARNALLSGNARFKRRLRRLGSSALGLVLALG VGLGVANRYVPVRYLLADAYSATGEQRELTLPDATHVRLNSRSAIDVRFDGERRQVVLLAGEILVETAHGDPRPFVVSSADGDMRALGTRFLVRREEPGT RLTVLQSAVAARAETLSEERVIKEGQQVLILPQGLQASEAAPALAGAWAQGMLVVENARLADLVAELGRYSPALLRVDPSIADLRVTGSFPLKDTRLALQ ALEPSLPVRSVRHNAWWFEVVPR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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