Strain | Pseudomonas aeruginosa strain AZPAE14404 AZPAE14404_contig_3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGGCTACACCATCCACAGCGCGGTGCACGAGGTCCGCCACGACGTCGAGTGCGTGCTGCACACCCATACCGCCGCGGGGATCGCGGTGTCCTGCCAGA AGCAGGGCCTGTTGCCGCTGTCGCAGCAATCGTTGTTCGTGCTCTCCAGCCTGTCCTACCACGCCTACGAGGGCGTCGCCCTGAACCATGAGGAAAAGGC CCGCCTGCAGGCCGACCTGGGGACCAGCAACTTCCTGATCCTGCCCAACCACGGCCTGCTCACCTGCGGCGGTTCCATCGCCGATACCTTCCTCATGATG TTCACCCTGCAACGCGCCTGCGAGGTACAGGTGATGGCGCAGAGCGGCGGCGCCGAGCTGATCCACATCCCGGGGCAGATCCTCGCCGGCGCGCGCGACA TGATCGCCGGGGTGATGCGCAGCAAGACCGGCATGGGCGGCCAGCTCGCCTGGCCGGCGCTGCTGCGCAAGCTCGACCAGCAGAACCCGGGCTACCGCCA
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DNA Sequence for Gene |
>NQ62_RS05765
GTGACCGCGGCGCTGCCCGGCATTCCCCTGGAGGCCTGGCGGAGGCGGGGCCGCACCCTGGATTTCAAGGGCTTCCCGATCCGCTACTGGGAAGCCGGGC AGGGGCGGCCGTTGCTGCTGATCCACGGTTTTCCCAGCGCCGCCTGGGACTGGCACTACCTCTGGGAGCCGCTGGCGCAGCGCTACCGCGTGCTGGTCTG CGACCTGCTCGGCTTCGGCGATTCGGCCAAGCCGCGCGCCCATCGCTACAGCCTGCTGGAGCAGGCCGACCTGCAACAGGCGCTGCTCGGCCGCCTGGGA GTCGACGAGCCGCTGCACGTGCTGGCCCACGACTACGGCGACAGCGTCGCCCAGGAACTGCTCGCCCGCCATCACGAAGGCCGGCTGCGGCTCGCTTCCT GCGTGTTCCTCAATGGTGGGCTGTTCCCGGAAACGCACCGCCCGGTGCTCAGCCAGAAGCTGTTGCTGAGCCCGTTGGGCGGGCTGTTCGGCCGGCTGTT CGACCGCCGCGCCCTGGCGCGCAACTTCGCCAAGGTCTTCGGCCCGCGCAGCCAGCCCGGCGAGACCGAGCTGGATGCCTTCTGGAGCCTGATCGAAAGC AACCAGGGGCAGCGGGTGATGCATCGCCTGATCCGCTACATCGTCGACCGCCGCGAGCAGCGTGAGCGCTGGGTGGCGGCGTTGCAGCACGGCGGGGTGC CGTTGCGGGTGATCGACGGCGCCGTCGACCCGATCTCCGGGGCGCACATGGTCGAGCGCTACCGGCAACTGGTCGCCGATGCCGACTGCGTGCTGCTCGA TGGCATCGGCCACTATCCGCAGATCGAAGCGCCGGCGGCGGTGCTCGAACATTACCTGGCGTTTCGCGCCCGACTGGATGATTCAGAGTTTTCTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGAGTTTGAGATTGCAGCAAGTGCCATCGCGCAAGGATCGGGGCTAGGGTGCTGGCGCCTCGCTGGACGAGGCGTTTCGTCACCCATGGAGGTCTCCAT GCACGATCCCGTTTCTCCCTTGCGCGTGTTCGACGAGGGCTCCTGGTTGTTCCGCCAGATGGTGCAGGCGCAGCCGTTCATCCGCCAGTCCGGGATGGTC CTCGCCGAACTCGGCCTGCTGCTGGCGCTCGGGCTCGGCTACCTGTGCTGGCAGGAAGGCAGTCGCTGGTACGCCGTCGGCGCCGGCTTCGCGTTGCTCG GCAGCCTGCTGCTGGTGGTGGTCCGGCACAACTACGACTGGTGGCTGTTCAAGCTCGGCCCGCGTGGCCGGCTGTACATTCCGTTCGACTGAAGCGGAAC ATCCCGCTGCCTTATCGGGCGCCATTCATGGTGGCGCGAAGCCTTGTCCCCGCCGGCGGGCTGGCCGACACTCGGGCAATCCTTCCTACTGCCCTGGAGT
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Amino Acid Sequence |
>alpha/beta hydrolase
MTAALPGIPLEAWRRRGRTLDFKGFPIRYWEAGQGRPLLLIHGFPSAAWDWHYLWEPLAQRYRVLVCDLLGFGDSAKPRAHRYSLLEQADLQQALLGRLG VDEPLHVLAHDYGDSVAQELLARHHEGRLRLASCVFLNGGLFPETHRPVLSQKLLLSPLGGLFGRLFDRRALARNFAKVFGPRSQPGETELDAFWSLIES NQGQRVMHRLIRYIVDRREQRERWVAALQHGGVPLRVIDGAVDPISGAHMVERYRQLVADADCVLLDGIGHYPQIEAPAAVLEHYLAFRARLDDSEFS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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