Strain | Pseudomonas aeruginosa strain AZPAE14404 AZPAE14404_contig_23, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTGTTCTGTCGCAACGTGCTGATCTATTTCTCCGCCGAGGTGAAGCGCGACATCCTGCTGCGCATCCATGGCACGCTCAAGCCTGGCGGCTACCTGTTCC TCGGCGCCTCCGAGGCGTTGAACAACCTGCCCGACCACTACCAGATGGTGCAGTGCAGCCCGGGCATCATCTACCGGGCCAAGTAGCGCAAGGAAGCGGA CCCGCGCCAGGTTGCGCCGGGGGTGACCTGGCAGCCTGGCGCGGGTCCGCTTGGGACGGGCAGGTGGGACGAGACTTTCGCCCACTGCCCAGGCTCCGAG CGCCACGCGCGGCGGCGCCGTCGCAGCCCGCTCGGTACAGGACGGCTGGCTCGGAGCGGGGCAGTTTAGGACTGCGCGATCTAGTTGTATTGACAGATAT TTCTGATAGTCAGGTGATCTGGCAAGTTGCCGCTTTGCCGGGGAACTGCTTACATGATTCAAGCGTTCCCTCGATCCGCCACGCCTACCAGGAGACTTCC
|
|
DNA Sequence for Gene |
>NQ62_RS29620
ATGGCCATCACTGCGCTGCCCTCGGCCGATGGGCAAGAGTTGACCATCCAGATCCAGGGGCGCTTCGACTTCGGGGCCCATCAGGACTTCCGCGACGCTT ACGAGCGCGTCGCGATCACTCCGCGACGCTATGTCGTCGACCTGCGCAACGCCACCTACCTGGACAGCTCGGCTCTTGGCATGCTCCTGCTGCTGCGCGA CCACGCCGGCGGCGAGAACGCGCAGATCAGCCTGGCGAACTGCAGCCCGGAAGTGCGCAAGATCCTCGCCATCTCCAACTTCGAGCAGTTGTTCAAGATC AGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GATGAATCCCCCGGCGGCGCGGATCGAGAGCCTGACGATTCTCATCGCCGAGGACAACGCGGCCGACCGTCTGCTGCTGTCGACCATCGTCAGCCGCCAG GGGCACCGCGTGCTGACCGCCGGCAACGGCCTGGAGGCGGTGGCGCTGTTCGAGGCCGAGCGGCCGCAACTGGTCCTGATGGACGTGATGATGCCGGTGA TGGACGGCTTCGAGGCGGCCCGGCGGATCAAGCAGCAGGCTGGCGAAGAGCTGGTGCCGATCATCTTCCTCACCTCCCTCAGCGAAACCGAGGCGCTGGT GCAGAGCCTGGAGGCGGGCGGCGACGACTTCCTCTCCAAGCCGTACAACCGGGTGATCCTCGAAGCCAAGATCAACGCCATGGGACGCCTGCACCTGCTG CAACGAACGGTGCTGGAGCAGCGCGACCTGATCGTCCGGCACAACGAGCACCTGCTCAACGAACAGCGGGTGGCCAAGGCGGTGTTCGACAAGGTGGCCC
|
|
Amino Acid Sequence |
>anti-anti-sigma regulatory factor
MAITALPSADGQELTIQIQGRFDFGAHQDFRDAYERVAITPRRYVVDLRNATYLDSSALGMLLLLRDHAGGENAQISLANCSPEVRKILAISNFEQLFKI S
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|