Strain | Pseudomonas aeruginosa strain AZPAE14404 AZPAE14404_contig_20, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTCGGCCTCGCCGTCGAGGACGTGGTCGCCATGGGCCGCACGCCGCACAAGGGCCTGTTCGACGGCCACGGCGCGGACGACCGCCAGCGGGTCCGCCAGG CGCTGCTCCAGGTCGGTCTCGAAGGGCGTGCCGCGAGCCCCTTCGCCAGCCTCTCCGGTGGCGAGAAGCAGCGCGCCCTGCTGGCTCGCGCGCTGGTCCA GGAACCGCGCCTGCTGATCCTCGACGAACCGACCAACCACCTCGACCCGCGCTACCAACTGGAGCTTCTGCGCCTGCTGCGCGGCCTCGGCCTGAGCACC CTGGCGAGCTTCCACGACCTCAACCTGGCGGCGGCCTTCTGCGACCGCCTCTACGTGCTCGACGGCGGGCGCATCGTCGCCCAGGGCACGCCGACCGAGG TGCTCGACGCCGACCTACTGTGGCGGGTGTTCGGCGTCGGCGCCCTGGTCGACCGCCACCCCCTCGCCGACCACCCGCGCCTGACCTGGATTACCCAAGC
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DNA Sequence for Gene |
>NQ62_RS28195
ATGAAGCACCCGATCCTGCACCACCTGCTGCTCGGCGCCCTGCTCGCCTGCGCCGATGCCGCGCTGGCCGAGCGCTACCCGCTCAGCGTGCGCAGTTGCG AGCGCGAAGTGACGTTCGAGCGCGCGCCGTCGCGCGCGGTCAGCCACGACATCAACCTCACCGAGATGATGGTCGCCCTCGGTCTGCAGACGCGCATGGT CGGCTATACCGGCATCAGCGGCTGGTGGAAGAATGCCGATCCCGGATTGATCGCCGCGCTCAAGCCGCTGCCCGAGCTGGTGGCGCGCTACCCCACGGCG GAAACCCTGCTCGATGTCGACGCCGACTTCTTCTTCGCCGGTTGGGGCTACGGCATGCGCGTCGGCGGCGACCTCACTCCGGCCAGCCTGGAGCCGCTGG GGGTGAAGGTCTACGAGCTGAGCGAATCCTGCGCGCAGATCGGCGAGCCGCGCCGCGCCAGCCTCGACGAGCTGTACCGCGACCTGCGCAACCTGGGACG GATCTTCGACGTCGAACCGCGCGCCGAGCGCCTGGTCGCCAGCCTCCAGGCACGCATCGAGCGCGCCCGCGCCGGCATCCCGGCGAACGCCGAGGCGCCG CGGGTGTTCCTCTACGACAGCGGCGAGGACCGCCCCTTCACCTCTGGCCGCCTGGGCATGCCGCAGGCGCTGATCGAGGCCGCCGGCGGTCGCAGCGTGA CCGACGACGTGGCGGCCAGTTGGACCCAGGTCAACTGGGAAAGCGTGGTCGCCCGCGATCCGCAGGTCATCGTCATCGTCGACTACGGCGAGACCAGCGC CGCGCAGAAGCAGCGTTTCCTCGAAGAGAACCCGGCGCTGCGCAGCCTGACCGCGATCCGCGAGCGACGCTTCATCGTCCTGCCCTATAACCAGGCCACG CCGGGCATCGGCAACGCCGCGGCGATAGAAACCCTGGTCGCCGGCCTCCACCCTCGGGCGCCACGTCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCTGTTCCGCAGCCCTCGCGCCTATTGCCTGTTGCTGGGCGGCCTGGTCCTGTTGCTCGGCCTGTCCTGCGTGGTCGCCCTCGGCTTCGGTCCGGCGCG ACTGGACAGCGGCCTGGTCGGCCGCATCGTCCTCCAGCGCCTGTTCGGCGTGGCGGCGGAGCCCGGCGCCTGGAGCGCCGGCCAGGAGCACATCGTCTGG CTGATCCGCGCCCCGCGGGTACTGCTCGGTGCCTGCGTCGGCGCCGGCCTGGCGCTGGTGGGAGCGGCGCTGCAGGCGGTCACGCGCAATCCGCTGGCCG ATCCGCACCTGCTCGGCGCCACCTCCGGCGCGACCCTCGGCGCGGTGCTGGTGGTGCTCTACATCGGCGAGGTGATCGGCCTGCTGACCCTGCCGCTGGC GGCCTTCCTCGGCGCCCTCGGCAGCATGCTACTGGTGCTCGGCGTGGCCAGCCGCGGCGGCCGCCTGGGCAGCGACCGGCTGTTGCTGGCGGGGGTCGCG
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Amino Acid Sequence |
>iron ABC transporter substrate-binding protein
MKHPILHHLLLGALLACADAALAERYPLSVRSCEREVTFERAPSRAVSHDINLTEMMVALGLQTRMVGYTGISGWWKNADPGLIAALKPLPELVARYPTA ETLLDVDADFFFAGWGYGMRVGGDLTPASLEPLGVKVYELSESCAQIGEPRRASLDELYRDLRNLGRIFDVEPRAERLVASLQARIERARAGIPANAEAP RVFLYDSGEDRPFTSGRLGMPQALIEAAGGRSVTDDVAASWTQVNWESVVARDPQVIVIVDYGETSAAQKQRFLEENPALRSLTAIRERRFIVLPYNQAT PGIGNAAAIETLVAGLHPRAPRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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