Strain | Pseudomonas aeruginosa strain AZPAE14404 AZPAE14404_contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCCACGGGTCACCCCGGCGGCCCTGGCGATCTGTTCCAGGCTGGTATGGGACACGCCTTTTTCCAGGAACAGTTCCTCGGCGGCCAGGAGGATGGCCG TACGGGTTTTTTCAGAATCTTCCTTTGTGCGTCGCATGCTGTGCTGGGTAGTCGAATGGGTCTCGGCAACGGGGCGGGGAGTGTACCGATTTTAGCCGCG CTCGGGCGGACTCGAAGTATTTCGACACCACCTTTGTCTAATGCTGCTCATTCATGAGCCGTGGATTCCGCGGATCCACGGTCTCCGGCCATGATCGGCG GGTGTCTTCGGTGTTATGCTGCGCGCTGCTTTTTCGGCGACTCCCCGGCTGTCCGTAGCATCTTCCCGCCAGTACCGGCCTTCAGGCCTGGAGCCGCCCG CCCTCACAGACGATTCAATGATAGGCGTCGTCGTCCCGCTTGCCGGGAGCCGCAGGGAAGTGCCTTGCCTGCCACCGACGCGCCCCGTGCCGAGCGATCC
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DNA Sequence for Gene |
>NQ62_RS05130
ATGAACCTGCGCATCCTGCTGATACTGGGAGCCCTGAGCGCCTTCGGGCCACTGGCCATCGACTTCTACCTGCCGAGCTTCCCGACCCTGGCCAAGGCCT TCGCCACCGACGTCGAGCACGTCCAGCTGAGCCTGGCCGCCTACTTCGCCGGCCTGTCCATCGGCCAGTTGCTCTACGGCCCGGTGGCCGACCGCTATGG CCGGCGCCTGCCGCTGCTGGTGGGGGTGAGTATCTTCACCCTGGCCTCGGCCGCCTGCGCCCTGGCGCCGACCCTGGAGTGGCTGATCGCCGCGCGCTTC GTCCAGGCTCTCGGCGGCTGCGCCGGGATGGTCATCTCGCGGGCAGTGGTGCGCGACCTGTGCGATCCGATCGGCGCCGCCAAGGCGTTTTCCCAGTTGA TGCTGGTGATGGGCCTGGCGCCGATCCTCGCCCCCGTGGCCGGCGGCCTGCTGCTGGACTGGCAGGGCTGGCAATCGATCTTCGTCTGCCTGACCCTGTT CGCCGCCCTGGCCGGCCTCGGCGTGGCGTTGTGGCTGCCGGAAACCATCCCGGCCGACGGCGAGCGACCGCCGCTGTCTGGCGCGCTGGGGCAGTACCGG CGGCTATTCGCCGACCGCCTGTTCCTCGCCTATGGCCTTTCCGGCGGGGTGGCGATGGCCGGGATGTTCGCCTACATCGCCGGTTCGCCCTACGTGTTCA TCCAGCTCTACGGGATTCCCGCCGAGCACTATGGCTGGCTGTTCGGCAGCAATGCCGCGGGCTTCATCGTCATGGCACAGGTCAACGCGCGGCTGCTGCG CTATCGCGGGCCGGCGTTCTGGCTGCGGCGGATCATCTGGGGCTACCTGGCGTGCGGCCTGGCCCTGCTGGGCATCGCTTCGCTGCAACCGGCCACGCTG TGGCCGCTGCTGGTTCCGCTGTTCGGATGCGTGGCCAGCCTCGGCTGCATCATTCCCAACGCTTCCGCCTGCGCCATGGCCGGACAGGGACAGCACGCCG GCAGCGCCTCGGCGCTGATGGGCAGCCTGCAGTTCAGCGTGGCGGCGGGCGCTTCGGCGCTGGTCGGCGTACTCCACGACGGCACGGCGATCCCCATGAC TCTGGTGATCGCCGTCTGCGGCGCGGTCGCGACCCTGCTCGCCTGGCAGACCGGGCGCCTGGAGCGCCAGGCCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCGGATCAGGCCGTTCGCTGCTTCAGTTCGGGCAGCACATGGGGCGCGCGCAGGCGCGCCTCGAGGCGGTCGACGAAACGCCGGGCCTCGCTTTCGCT ACGGAAGTTGACGGCCTGCTGGTCGAGGCAGACCTGCCAGCATTGGCCTTTCGGGGTTTGCGACGGGCGGACGAGGATGTTCATGGCGATTCATCCATCG GGGCTGGAAAGGGAGCTTCAGTCTAGTCCTGTCGGCCCGGAAAACACTGACCGGGATCAGTTTGCCGACAACTGGTCGCCGCTTCGTTTACAGCCCCGCC GCAGAGCGCTTCAGGCTCCTCCCTCGCCCTGCCTTACCCGCTGCCGGTAGGCGCTCGGCGACAAACCCATGACCTTGCTGAACAGGCGCGAGAAGTAGTA GCTGTCGTCGTAGCCGACCGCCTGGCCGACCCGGGCCACGCTCTGGTCGCTGCTGTCCAGCAACTGGCAGGCGTACTCGATCTTCAGGTGCAGGAAGTGC
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Amino Acid Sequence |
>MFS family transporter
MNLRILLILGALSAFGPLAIDFYLPSFPTLAKAFATDVEHVQLSLAAYFAGLSIGQLLYGPVADRYGRRLPLLVGVSIFTLASAACALAPTLEWLIAARF VQALGGCAGMVISRAVVRDLCDPIGAAKAFSQLMLVMGLAPILAPVAGGLLLDWQGWQSIFVCLTLFAALAGLGVALWLPETIPADGERPPLSGALGQYR RLFADRLFLAYGLSGGVAMAGMFAYIAGSPYVFIQLYGIPAEHYGWLFGSNAAGFIVMAQVNARLLRYRGPAFWLRRIIWGYLACGLALLGIASLQPATL WPLLVPLFGCVASLGCIIPNASACAMAGQGQHAGSASALMGSLQFSVAAGASALVGVLHDGTAIPMTLVIAVCGAVATLLAWQTGRLERQAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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