Pseudomonas aeruginosa AZPAE14404, NQ62_RS04160
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14404 AZPAE14404_contig_2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGTGCGCCTGGCGCGCGATGGCGAGCCGCCGATACCGGGGCAGATCCTGCTGGCGGGGACCAACAATCACATCCGCCTGTTGCGCAACGGTTCGCTGG TGTACACCGCCGAACCGCGTTCTTTCGTCTACCGGCCGTCCATCGACGTGTTTTTCGAGAGCGTGGCGAACTACTGGCGTGGCGACGCCGTGGGCGTGCT GCTGACCGGCATGGGCCGCGACGGCGCCCAGGGCCTCAAGCAGATGCGCGAGCGCGGCTTCCTCACCATCGCCCAGGACCAGGCCAGTTGCGCGGTCTAC GGGATGCCGAAGGCCGCGGCGGCGATCGATGCCGCGGTGCAGATCCTTTCCCTGGAAAAGATCGCCCCGCGCCTGGCGGAGGTATTCGATTAGCCGGGCG CGAGTCCGGTCAGGCGCCAGGGTAGGCGCCGGCGCCCGCCGTGGCGGTGCGTGGAACAGCATTCAATTTGATACGAGGGGCCCCGGTCCCGGAGAGAAAC
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| DNA Sequence for Gene |
>NQ62_RS04160
ATGCACAACCCTCATGAGAGCAAGACCGACCTGGGCGCCCCTCTGGACGGCGCGGTCATGGTACTGCTTGTCGATGATCAGGCCATGATCGGAGAGGCTG TGCGTCGCTCGCTGGCGAGCGAGGCGGGCATCGACTTCCACTTCTGTTCCGATCCGCAGCAGGCGGTGGCGGTGGCCAACCAGATCAAGCCGACGGTGAT CCTCCAGGACCTGGTGATGCCCGGCGTCGACGGCCTCACGCTGCTCGCCGCCTACCGCGGCAACCCGGCGACCCGCGACATCCCGATCATCGTCCTGTCG ACCAAGGAAGAGCCGACGGTGAAGAGCGCGGCGTTCGCCGCCGGCGCCAACGACTACCTGGTCAAGCTGCCGGACGCCATCGAGCTGGTGGCGCGGATCC GCTACCACTCGCGTTCGTACATCGCCCTGCAGCAACGCGACGAGGCCTATCGGGCGCTGCGCGAGAGCCAGCAGCAGTTGCTGGAGACCAACCTGGTGCT GCAGCGGCTGATGAACTCCGACGGCCTGACCGGGCTCTCCAACCGTCGTCACTTCGACGAATACCTGGAGATGGAGTGGCGCCGCTCGCTGCGCGAGCAG TCGCAACTGTCGCTGCTGATGATCGACGTGGACTATTTCAAGAGCTACAACGACACCTTCGGCCACGTCGCCGGCGACGAGGCCCTGCGCCAGGTCGCCG GGGCCATCCGCGAGGGCTGCAGTCGCTCCTCGGACCTGGCGGCGCGCTATGGCGGCGAGGAGTTCGCCATGGTCCTGCCGGGCACCTCGCCGGGCGGCGC GCGGCTGCTGGCGGAAAAGGTCCGGCGTACGGTGGAGAGCCTGCAGATCAGCCACGACCAGCCACGCCCGGGCTCGTACCTGACCGTCAGCATCGGCGTC AGCACCCTGGTGCCGGGCGGCGGCGGACAGACCTTCCGGGTTCTCATCGAGATGGCCGACCAGGCGCTCTACCAGGCCAAGAACAATGGCCGCAACCAGG TTGGCCTGATGGAACAACCGGTGCCGCCGGCCCCGGCGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGCGCGCGGCGGCCATGCGTCGCCGGCCGGCATTAAATAGAGGCCGGCGTACTGCCCGCAGGGCGCAAGTGCAGTATACTTCGCAGCTTTTCGACGTT TTCCCGCGAGTGAGCGCCAGCCATGGAAATCAACCCGATCCTCAACAGCATCAAGGACCTCTCCGAGCGCACCCAGACCATTCGGGGGTATCTTTGACTA CGATCAGAAGCATGATCGCCTGGTCGAAGTAAACCGCGAGCTCGAAGACCCCAACGTCTGGAACAACCCCGAATACGCCCAGAACCTCGGCCGCGAGCGC GCCCAGCTGGCGCAGGTGGTGGAAACCCTGGACGACCTGACCAGCGGCCTGGCCGACTCCCGCGACCTGCTGGACATGGCGGTCGAGGAAGACGACGAGG GCGCCGTCGACGACGTTGCCAACGAAGTCGAGCGTCTGCGCGAGATCCTCGAGAAGCTGGAGTTCCGCCGCATGTTCAGCGGCGAGATGGACCCGAACAA
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| Amino Acid Sequence |
>diguanylate cyclase
MHNPHESKTDLGAPLDGAVMVLLVDDQAMIGEAVRRSLASEAGIDFHFCSDPQQAVAVANQIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLS TKEEPTVKSAAFAAGANDYLVKLPDAIELVARIRYHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQ SQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRPGSYLTVSIGV STLVPGGGGQTFRVLIEMADQALYQAKNNGRNQVGLMEQPVPPAPAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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