Pseudomonas aeruginosa AZPAE14404, NQ62_RS26210

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14404 AZPAE14404_contig_15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCTTCAGCGGTGCCGGAGCGGAACTCTTCGAGCTGTCCCTGGTGGATTTCGCCGGCAACGGCGCGCGCCTGGCGCACAACCGCAAGCTGCTGGAAACG GTACTCGGGTCGATGGACGCCCTCAGCAGTCGGGTGAGCTGGACCGACACCCTGAAGAGCAAGATCCTCCTCGGCGTCTGGGGCGAGTTTCCCGCCCTCG ACCGCCACTACGTGGCCGCCTGTCGCGCGCTGTATCCACGCCGGGGCCTGACGAGCGTCAACGGCGGCACCCTCACCGCGCTGCACCGCCTGATCGGCGA AGAAAGGCTGTCGTTCCCGCGCCTGGAGACCGCCCGCAAGGGGCTCCTCTATCCCACCGGACGCCTGGCCGACATGGCTTTCTTCCAGTACGGCCTGGAA AACGCCTGAGGCGCTGCGCCGCCGATCCGGGGGACTTGTAGGCATGCCCTCGCTGTAAGTAGTATGAGACTCATTCTCAATTACAACAGCGATCCCCTCC
DNA Sequence for Gene
>NQ62_RS26210
ATGCCGCCGGCCGACGCCTCCCTGCACGACGCTGTGAGCCATCTCTATCAGGACCACCATGGCTGGCTGCAAGGCTGGTTGCGGCGACGCCTGGGCTGCG CGGAAAACGCCGCCGACCTGGCCCAGGACACCTTCGCCCGCCTGCTCGCCTCGCGCCGGGTACTGGATGCGCGCGAACCGCGCGCCTACCTGACCACCGT CGCCAAGGGACTGATGATCAACTGGTTCCAGCGCCAGTCGCTGGAGCGCGCCTACCTCGATGCCCTGGCCAACCTCCCGGAAGACCTCGCGCCGCCGCCG GAACAGCGGTTGATGGTGCTGGAAACCCTGCATGAAGTAGACGCCCTGCTCGGCAGCCTGCCGGACAGGGTCCGCCAGGCGTTTCTCCTGGCGCAGATCG AAGGCCTGAAGTACGAAGCCATCGCCGAGCGCCTGGGCGTGTCCCTGGGTTCGGTCAAGCGCTACATGCAGCAGGCCTTCCGCCAGTGCCTGGAGCTGAT GGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATTCCGCGGGCGAAGGCCGGATTCCCTCGCCGATCCTCGACGAGGCCGCCGAGTGGCTGGTGCGCCTGCAGGACAGCGGCTGCACCGACGACACGCGCCA GGCGTGCGCCCAGTGGCGGCAGCGCAGCCCACAGCACGCCCATGCCTGGGAGCGCGCCGAGCGCCTGCTGCAATGCCTCGGCCGACTGCCGCCGGCGCTG GCCCTGCCGACCCTCGGCCGCGAGCGCGGGCTGGACCGGCGGCGCGCGATCAAGCACCTCGCCCTGGTCCTCGGCGGCGCCTCGCTGGGGCTCGCCACCT GGCAGGCCGAGCCGTTGCGCGACTGGCTGGCCGACCAGCGCACCGGCGTCGGCGAACAGCGCCGCCTGACCCTGCCCGACGGCAGCCTGCTGACCCTGAA CACCGACAGCGCCGTGGACCTCGCCTTCGACGCCAGCCAGCGGCTGGTACGCCTGCTGCGCGGCGAGATCTTCGTCGATAGCCGCGCCGACCCGCGTCCG
Amino Acid Sequence
>RNA polymerase sigma factor
MPPADASLHDAVSHLYQDHHGWLQGWLRRRLGCAENAADLAQDTFARLLASRRVLDAREPRAYLTTVAKGLMINWFQRQSLERAYLDALANLPEDLAPPP EQRLMVLETLHEVDALLGSLPDRVRQAFLLAQIEGLKYEAIAERLGVSLGSVKRYMQQAFRQCLELME
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site