Pseudomonas aeruginosa AZPAE14404, NQ62_RS25790
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14404 AZPAE14404_contig_14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCAGGTGGCGGAAGCGGCTCAGGCGCGGTAGCAGCCAGCGCAGGGTAAGGGTGGAAGGCGCCTTCAGGCGCAGGGTGGCGTCGTCCACGTGCAGGGCGGT GCAGGCCCGTTCCAGCGCATCGAAGCCGTCGCGCAGCCCGGGCAGCAGCAGGCGTGCCGGCTCGGTCAGCTGCAACTGGCGGCCATGGCGCTCGAACAGA CGACAACCGAAGAGCTCTTCCAGGGTACGGATGTGCCGGCTCACCGCGCTCTGGGTTATCGCCAGTTCCTCGCCGGCGCGGGTGAAAGAGGCGTGCCGGG CGGCAGCCTCGAAGGCGCGCAGGGCATACAGCGGGGGCAGGCGACGGGTCATTGGGGAATTACCTTTTTCATGACTTTTACTCATGCCTGGCATCTTGTT TTTCCTTTTGTGGAGCCATGCCAGCCGCACCGAGAATAGCCGCATTCTCAACGCCGACAGGCCATCGCGGCAACCATCTCCTCCTGAGCCTTACTCATCC
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| DNA Sequence for Gene |
>NQ62_RS25790
ATGTCCTCACCATCCCTCGTCGAACTCAAAGCCATCCTGCGCCTGGCGGGCCCGTTGATCGCCGCCCAGCTGGCCTATGTCGCCATGGTCTTCACCGACA CCGTGATGATGGGCAAGCTCGGCCCCGACGCGCTGGCCGCCGGCGGCCTGGGCGCGGTCAGCTACGCCTTCGTCTCGACGTTCTGTGTCGGCGTGGTGGC AGCGGTCGGCAACCTGGTGGCGATCCGTCACGGCTGCGACGACGCCGCTGGCGCCGCCGCGGCCGCTCGCTCCGGACTCTGGGTCGGCGCCGCGCTGGCC CTGGCCGCCGGCCTGCTGCTATGGAACCTGCGGCCGCTGCTGCTGCTCTTCGGCCAGGCGCCGCAGACGGTGGACGGCGCCATGCAGTTCCTCCACAGCC TGACATTCGCCCTGCCCGGCTACATGGCCTTCATGGTCCTGCGCGGCTTCACCAGCGCCATCGACCGCGCCGGCCCGGTGATGGCGATCAGCGTGCTCGG CGCGCTGGCCAACCTGGCTCTCAACTATTCCTTCATAGAAGGCCTGTTCGGCCTGCCGCGCCTGGGCCTGGCCGGTATCGGCCTGGTCACCGCCCTCGTC ATGAACTGCATGCCGCTGCTGCTGGCCCTGTATATCCGCCGGCAGCCGGCCTATGCCGCGTACTCGCTGCTGCGCGGACTGGGACGGCCGCAGCGGGCGA TGGTCGAGGAGATCCTGCGCCTGGGGCTGCCCATCGGCGGCACCTACGCGGTGGAGTCGGGGATGTTCACGGTCGCCACCCTGTGCATGGGCATCATCGG CGATCACGCCCTGGCCGCGCACCAGATCGCCATCCAGGCGGTATACGTGGCGTTCATGGTGCCGGTGGGGTTGTCGTACGCCACCACCTACCGCATCGGC CAGCATTTCGGCGCCGGCCGCCTGCTCGAAGCACGCCGCGCCGGGCGTGTCGGCATCGGCTTCGGCGCGCTGTGCATGCTGCTCTTCGCCGGGCTCTTCT GGTGGATGCCGGAGGTCATCATCGGCCTGTTCCTCGACCGCGACGCCCCGGCCAACCGGGAGGTGGCCGCGATGGCCGTCTCGCTGCTGGCGATCGCCGC CTGGTTCGAGCTGTTCGACGGCACCCAGAACGTCGCCATGGGCGCGATCCGCGGTCTCAAGGACGCCCGCACCACCTTCCTGGTCGGCCTGGCCTGCTAC TGGCTGGTCGGCGTGCCGCTGGCCTGCCTGCTGGCGTTCGCGGCCGGCTGGGGCGCCGCGGGCGTCTGGTGGGGGCTGGCCGGCGGCCTGGCCTGCGCAG CCATCGGCCTGACCCTGGCCTTCGAGTGGAAGACCGCGCGGTTGCTGCCGAAAGCCACGGCCAGCGAGACGTCGGCGCTCAATTGCCGAGCGGCTGGCCG CGGTGCGCCGAGCGCTCGCCTATGCCCAGGAAACGCGCCAGTTCCGCCAGCGGCAGCGGCGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCAGTAGCCCTGCACCTGGTCGCAACCGAAATCGCGCAACTGCTCCTGCTGGCGCAGGGTCTCCACGCCTTCGGCAACCACTTCCAGGTTGAGGTTGTG CGCCAGGTTGATCATCGCCCGCACCAGTTGGAAGTTTTCCGCCCGCTGGTCCATGCCGCCGACGAAGCTGCGGTCGATCTTCAACAGGGTGATCGGCAGG CTATTGAGGTGGACGAAGGACGAGAAACCGGTGCCGAAGTCGTCCAGCGAAAAGCGCACGCCCAGTTGGCCGAGCGCCTGCATGGTCTGCAGCACCTGGT CGCTACGCCGCATCACGGCGGTCTCGGTCAGTTCGAACTCGAGCCAGCGCGCGTCGACGCCGTGCTCTTCGATCAACCGTTGCAGGGTCGGCAGCAACTG GCTGTCCTGGAACTGGCGGAACGACAGGTTCACCGCCATGTGCAACGGCTCCAGGCCGCGCCCGTTGAGCCACTGCATGTCGCGCAGGGCGCGGGCGATG
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| Amino Acid Sequence |
>multidrug transporter
MSSPSLVELKAILRLAGPLIAAQLAYVAMVFTDTVMMGKLGPDALAAGGLGAVSYAFVSTFCVGVVAAVGNLVAIRHGCDDAAGAAAAARSGLWVGAALA LAAGLLLWNLRPLLLLFGQAPQTVDGAMQFLHSLTFALPGYMAFMVLRGFTSAIDRAGPVMAISVLGALANLALNYSFIEGLFGLPRLGLAGIGLVTALV MNCMPLLLALYIRRQPAYAAYSLLRGLGRPQRAMVEEILRLGLPIGGTYAVESGMFTVATLCMGIIGDHALAAHQIAIQAVYVAFMVPVGLSYATTYRIG QHFGAGRLLEARRAGRVGIGFGALCMLLFAGLFWWMPEVIIGLFLDRDAPANREVAAMAVSLLAIAAWFELFDGTQNVAMGAIRGLKDARTTFLVGLACY WLVGVPLACLLAFAAGWGAAGVWWGLAGGLACAAIGLTLAFEWKTARLLPKATASETSALNCRAAGRGAPSARLCPGNAPVPPAAAAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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