Pseudomonas aeruginosa AZPAE14404, NQ62_RS24115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14404 AZPAE14404_contig_14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGCTCGCGCCCCCGAGGATTTCTCCAAGAAGTTCCGCTATAACCAGCGGCGCGAAGTGCGCCTGGTGGAGGAGGCTGGTGGCCAGGTGCGCCAGGCAGA CAGCTTCGCCCCGGCCGAGTTCGCCGCCATCTATCTTGAACTGTTCCAGCGTCGCTGGGGTTTCCCGGCCACCGGCGCGGAGCGCATGGCCGAGGTCTTC GAGCGGCTGCGCGAATTGCTGCGCGGCTCGGTCCTGCTGCTCAACGACCAGCCCATCGCGGTCCAGGTACTGTATCGCGCCGAAGCGCCGGGCTGGCTCA GCGTCGAGTACATCAACGGCGGCGTCGATCCGCAGACCCGCGAGTTCAGCCCTGGCAGCGTGCTCAGTTACCTGAACACCCAGGCCGCCTGGGAGGATGC GCGGGCGCTGGGCAAACCCCTGCGCTATTCGTTCGGTCGCGCCGACCGCGAATACAAGGATCGCTGGTGCCATCCTTCTCCGGTCTTCCAGGTCTGAAGC
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| DNA Sequence for Gene |
>NQ62_RS24115
ATGAGCGCACGCAAGCAGCAGTTGCTCAAGCGTCATCGACGCAACAAGCGGATCGGCCTACTGGTTGCGCTGCTGGCATTGCTGGCCGTCGGTCTGCTGG TCAGCCCCTGGTTGTTGCCGATCCTCCTCGTGGCCCTGTGGGTCGCCCACGAAGCCTGGTTCGCCGATCACCTGTTCTATTCGCCGGGCGAGGACTACCG CTACCGTTTCGCGGAAGGGGTCGAGTCGCTGCCGGTACGCCTGGCGGATGGCCGTCTGCGAGTCGACGGCGAGCTGCGCGAAGGCGATACGCTGGTGCTT GGCATCGGCGTGCGCGCTGGCTGGCTGGGGCGTTTCCTCGAACCCTCGGTACTGCTGGAAGGTGGCGCGGAGGCCGATGCCCAGGCTTTCGAACGTGGGG TGAACGGCTTGCGCTACCTGAACCTGACGGGACTGGCCGGGCCGCTGGGCGAGGGCCGGATTCGCCTGCGCGGCCGGCATTGCCGGTTGGTCGGCGAACC GACCCTGTGGCGTGCGCGCCATCCCGATTACCGTGAGCGGCGGGTGATGGTCATCGCTCCGCATGCCGACGACGCCGAGCTGGCCGCCTTCGGCCTCTAC AGCCAGGCACGCGAGGCCTGGATCGTGACCCTGACCGCCGGCGAGATCGAAACCGAGCATTACCGCCGCATGGGCCTCGACGGAATAGCTGCGGCGCGCC TGAAGGGCCGCCTGCGCGCCTGGGATAGCCAGGCCGTGCCGGCGTGGGGTGGGGTGCCGGCCGAGCGCTGCGTGCAACTGGGTTATTTCTGCCTGCAATT GCCTGCCATGCAGGCGAACCCGGGCGAGGTGGTACCGTCCCGTGAGGCCGATCTCGCCGATATCCGTCCGTTCCGCCAGTTCAACCGCCTGCGCCTGGCC AGCGATGCCGACGGCCTGTCGACCTGGAACAATCTGCTGGCCGATCTCCGCGAGCTGATCCTGCTGGCACGTCCCGAGGTCATCGTCCTGCCTCATCCGC ATTTCGATCCGCACCCGGACCATGTCCGCGCCCAGGAGGCCGTGCGCGAGGCGCTCCAGGGGCTGGACTGGCAGCCGCAGGCATTGTTGCACTATGCCAA TCACCTGCACGACAACGATCGCTGGCCGATGGGCGATGCGCACATGGGGGTCAGCCTGCCGCCGCTGACCGAAGAATGCTCGCCGTTGCTGCCATGGACG CTGGCGCTGGAGCGCACGCGCCAGGTGGACAAGGCCATGGCCTTGGGCATGATGCACGACCTGCAACCCAGGCCGCCGTTCAAGCGCCGTCTGCGCCGCC GTCTGCAGGGCTGGCTGGCCGGGCGTCGCTGGCCGGCATACGGCGAGGACGAGTTCATGCGCAAGGCGGTGCGTCGGCACGAGTTGTTCTGGGTGGAGTC GCTGGACGGGGAGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCTTGGGTCGAGCGTTCGGCAAGGTTCGAGCCGCCATGCTGCTTCGGAGCAGCCGCGAGGATGAAGGTCTGATGAAAGTTCTGTTTCTGGTCCAGAAAG AGCAGCGAGCGATCCTGGATCGCCTGTACGACGGCATCGCCGCCCATTGCGAGTGCGATACCCGCTGGCTGAGCAGCGAGGAGCAGGCCGACCTGCGCGG CTACTTCCGCAAGCACGTGGATGTCTCGCGCTACGACCGCATCCTGTTCTTCCTCCGTTTCAAGAAGGAAATGCGCCAGGTCCGCTTCATCCGCAGCGTG CCCAACCTGGTGATCCTCGAGCACGATGCCTACCAGAACTACATTCCCTGCAAGTACACCGGCAAGTTCAGCGCCCATTACCGGCGCCTGCCCTGGGCAC GGGTGATCAGTTCGGGCCATACGGTCAGCGAACGCCTGCGCCAGGAGGGATTCGACGCGGTATTCGTGCCCAAGGGCTACGACCAGACCCTGTTGCATGA
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| Amino Acid Sequence |
>hypothetical protein
MSARKQQLLKRHRRNKRIGLLVALLALLAVGLLVSPWLLPILLVALWVAHEAWFADHLFYSPGEDYRYRFAEGVESLPVRLADGRLRVDGELREGDTLVL GIGVRAGWLGRFLEPSVLLEGGAEADAQAFERGVNGLRYLNLTGLAGPLGEGRIRLRGRHCRLVGEPTLWRARHPDYRERRVMVIAPHADDAELAAFGLY SQAREAWIVTLTAGEIETEHYRRMGLDGIAAARLKGRLRAWDSQAVPAWGGVPAERCVQLGYFCLQLPAMQANPGEVVPSREADLADIRPFRQFNRLRLA SDADGLSTWNNLLADLRELILLARPEVIVLPHPHFDPHPDHVRAQEAVREALQGLDWQPQALLHYANHLHDNDRWPMGDAHMGVSLPPLTEECSPLLPWT LALERTRQVDKAMALGMMHDLQPRPPFKRRLRRRLQGWLAGRRWPAYGEDEFMRKAVRRHELFWVESLDGEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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