Pseudomonas aeruginosa RP73, M062_19635

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06170
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other RP73 genes in this class
Transcriptional regulators Other RP73 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG prp02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 171 223 2.7E-8
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 22 138 2.0E-16
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 172 186 1.3E-5
SUPERFAMILY SSF46894 C-terminal effector domain of the bipartite response regulators IPR016032 Signal transduction response regulator, C-terminal effector 162 231 2.31E-16
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 20 146 3.13E-25
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 172 228 5.20363E-12
CDD cd17535 REC_NarL-like - - 24 143 4.14254E-37
SMART SM00421 luxrmega5 IPR000792 Transcription regulator LuxR, C-terminal 169 226 3.5E-10
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 167 231 3.9E-13
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 186 202 1.3E-5
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 202 214 1.3E-5
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 24 139 5.9E-23
Gene3D G3DSA:3.40.50.2300 - - - 20 161 4.5E-29
PANTHER PTHR43214 TWO-COMPONENT RESPONSE REGULATOR IPR039420 Transcriptional regulatory protein WalR-like 21 231 4.8E-37

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.