Strain | Pseudomonas aeruginosa strain AZPAE14404 AZPAE14404_contig_10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACAGATGCTGCAGGCAGACCTGGCCAAGGCCGGCATTCAGCTGACCATCCGTTCCCTGGAATGGGGCGAGCTGCTCAAGCGTTCGAAGGCCGGCGAGCAC GACCTGTCGCTGCTTGGCTGGGCCGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGAACCTGAGCTGCGCCGCCGCCGAGTCGGGTGAAAACCAGG CGCGCTGGTGCGACAAGGACTTCGAGGCGCTGATGCGCAAGGCCCGCGAGGTGAGCGATCCGGCCGAGCGGGCGAAACTGTACGAGCAGGCCCAGGTGGT ATTCCACGAACAGGCCCCATGGATACCGCTGGCCTACCCGAAGCTGTTCAACGTCCGGCGGAACACGGTGCAGGGCTACGTGATCAATCCGTTGAGCAAC AACAACTTCGCCACCACCTCGGTGAAGCCGTAGAAGAACAAGGACCACAGCCCTGCCGCCAGCGGGGCGCACGGTCCGCGATGAGGAGTTACCCGCCAAC
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DNA Sequence for Gene |
>NQ62_RS18035
ATGCTTAGTTTCATTGCACGACGATTGGGGTTGCTGATCCCCACCTTCTTCGGCGTGACGCTGCTCACCTTCGCGCTGATCCGCCTGATTCCCGGCGACC CGGTGGAAGTGATGATGGGCGAACGTCGCGTCGATCCGCAGATGCATGCCGAGGCCCTGCACCGCCTGGGCCTGGACAAGCCCTTGTACCAGCAGTACCT GGACTACGTGGGCAATCTGGCACAGGGCAATCTCGGCGAATCGCTGACCACCCGCGAAGGCGTCTGGCACGAATTCCTCACCCTGTTCCCGGCGACCCTG GAACTGTCCCTGGCCGCCATGCTCTTCGCCGGCACCTTCGGCCTGCTGGCCGGGGTGATCGCCGCCCTGAAACGCGGTTCGTTGTTCGACCACGGGGTGA TGACGGTGTCCCTCGCCGGCTATTCGATGCCGATCTTCTGGTGGGGCCTGATCCTGATCATGCTGTTCTCCGTGTCGCTGGGCTGGACGCCGGTGTCCGG CCGTCTCGACCTGCTCTACGACATCGAGCCGAAGACCGGCTTCATGCTGATCGACACCCTGCTTTCCGACGAACAGGGCTCGTTCCTCGATGCCGTGCGC CACCTGATCCTGCCGGCCATCGTGCTGGGCACCATCCCGCTGGCGGTGATCGCCCGCATGACCCGCTCGGCGATGCTCGAGGTGCTGCGCGAAGACTATG TGCGCACCGCCCGCGCCAAGGGCCTGTCGCCGGCCCGGGTGGTCTTCGTGCACGCCCTGCGCAACGCGCTGATTCCGGTGCTGACGGTATTCGGCCTGCA GGTCGGCACGCTGCTCGCCGGCGCGGTGCTGACCGAAACCATCTTCTCCTGGCCGGGCATCGGCAAGTGGCTGATCGACGCCATCAGCCGTCGCGACTAC CCGGTGGTGCAGAACGGCATCCTGCTGGTCGCCACCCTGGTCATCCTGGTCAATTTCGTCGTGGACATCCTCTACGGCCTGGCCAACCCGCGCATTCGCC ACCAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGCCAGCCGATGAACGCCATGCACAACGCTCCCGCCAGCGACCCGAGCCTGGTCTACCCGTCCCCGCTGAAGGAATTCTGGCAGGCCTTCGCGCACAA CAAGGGCGCCCTCGGCGGCCTGCTGTTCATGCTGCTGATCGTGTTCTGCGCGCTGTTCGCCCCCTGGGTCGCCCCCTACGATCCGAGCGAGCAGTTCCGC GACTTCCTGCTGACCCCGCCATCCTGGCTGGAAGGCGGCCAGGCGCGCTTCCTGCTCGGCACCGACGAGCTGGGCCGCGACCTGCTCTCGCGGCTGATCC ACGGCGCCCGCCTGTCGCTGCTGATCGGCCTGTCCTCGGTGGTGATCTCGCTGATCCCCGGCATCCTCCTCGGCCTGCTCGCCGGCTTCTCGCCGAACCG TGCCGGGCCGCTGATCATGCGCCTGATGGACATCATGCTGGCGCTGCCGTCGCTGCTGCTGGCGGTGGCCATCGTGGCGATCCTCGGCCCGGGCCTGATC
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Amino Acid Sequence |
>peptide ABC transporter permease
MLSFIARRLGLLIPTFFGVTLLTFALIRLIPGDPVEVMMGERRVDPQMHAEALHRLGLDKPLYQQYLDYVGNLAQGNLGESLTTREGVWHEFLTLFPATL ELSLAAMLFAGTFGLLAGVIAALKRGSLFDHGVMTVSLAGYSMPIFWWGLILIMLFSVSLGWTPVSGRLDLLYDIEPKTGFMLIDTLLSDEQGSFLDAVR HLILPAIVLGTIPLAVIARMTRSAMLEVLREDYVRTARAKGLSPARVVFVHALRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIDAISRRDY PVVQNGILLVATLVILVNFVVDILYGLANPRIRHQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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