Strain | Pseudomonas aeruginosa strain AZPAE14404 AZPAE14404_contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATGACCACGCGCCTGCTCTATGAGTCGAGGCGCAACGGCACGCTCCCGGAGTTCAAGCCGTCCGAGGTGCTGGCGCACATCAACCGCGGCCTGATCAACA CCAAGTTGGGCAAGCACGTGACCATGCTCGGCGGGGTCATCGACCTGGAGAAGAACAGCCTGACCTACAGCATCGGCGGCCACCTGCCGCTCCCGGTACT GTTCGTCGACGGGCAGGCGAGCTACCTGGAAGGCCGTGGCCTGCCGGTGGGCCTGTTCGACGATGCGAGCTATGACGACCGGGTCATGGAGTTGCCCCCT TCCTTCAGCCTGTCGCTGTTTTCCGATGGCATCCTCGATGTGCTGCCAGGAGCTACGCTGAAGGAGAAAGAGGCTTCGCTACCGGAGCAGGTGGCAGCCG CCGGAGGCACCCTCGACGGGCTGCGCCAGGTCTTCGGGCTGGCCAACCTGGCGGAGATGCCGGATGATATCGCCTTGCTGGTGTTGAGCAGGAACCTTGC
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DNA Sequence for Gene |
>NQ62_RS02110
ATGAGTACCGGTAAAATCCAGTTTGCCGAACAGAACGGCTCCTTCGTTCTGAAATTCGTCGGTGAGGTCCGCCTCACCCTGTGCTCGGCCCTGGATTCCA CCATCGAAAAGATCTTCGCTGCGCTGAATTTCTCGGCGATCATCATCGATCTTACGGAAACCCAGAGCATCGATAGCACCACGCTCGGCCTGCTGGCCAA GCTGTCCATCCTGTCGCGGCAGAAAATCGGCCTGTTGCCCACGCTGGTGACCACCAATCCGGACATTACCCGTCTGTTGCAGTCGATGGGTTTCGATCAG GTGTTCAATATCGTCGATCGTCCGATTCCGTGTCCGGAGTGCCTGTCCGACCTGCCGCCGCAGGACCAGTCGGAAGATGTGGTGCGCGACAAGGTCCTGG AGGCGCACCGCATCCTGATGGGCCTCAACGAATCCAACCGCGAAGCCTTCCACGACCTGGTCAGCGCCCTGGAGCGCCATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGTCGATCCCTTCTCGAACTCCTGCTGAATTCCGCTGTGCCGGAACGGGACGCCCTGCATGCGCGTCCCGCCGGCAGCGGCGATCAGTGGCGGGTCGC CAACTGGTATTCGAGCTTTTCCTGGTCGCGTGCGAACAGGCGGATGCCTTCGGCCAGCTTTTCGGTGGCCATGGCGTCCTCGTTCATCTGCCAACGGAAA GCGCTCTCGTCGAGCACCTGGCGCGGCTCGCCTTCACCCGGCAGCAGCAGCCGCGGCAGCTCGCCCTGGGCGTCAGCCAGTTGTTGCAGCAGGTCGGGAC TGATGGTCAGGCGGTCGCAGCCGGCCAGTTGCTCGATCTGGCCGAGATTGCGGAAGCTGGCGCCCATCACCACCGTCTTGTAGCCGTTGGCCTTGTAGTA GCGATAGATGCGCGAGACCGACTGCACGCCGGGATCCTCGGCGCCGGCGTAGTCGCGGTTCTCGCTCTTCTTGTACCAGTCGTAGATGCGCCCGACGAAC
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Amino Acid Sequence |
>anti-anti-sigma factor
MSTGKIQFAEQNGSFVLKFVGEVRLTLCSALDSTIEKIFAALNFSAIIIDLTETQSIDSTTLGLLAKLSILSRQKIGLLPTLVTTNPDITRLLQSMGFDQ VFNIVDRPIPCPECLSDLPPQDQSEDVVRDKVLEAHRILMGLNESNREAFHDLVSALERH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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