Strain | Pseudomonas aeruginosa RP73, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCCGACCCGCAGCAGGTTGCCATCGGGATCGATCAGGGCGAATTCGCGCATGCCCCAGGGCTGGTCTTCCAGGACCGTGATGCGTGGAATCCCCTGGCC GCCCAGGCCGAGGGCCGTGGCCTGGCGATGCAGCGCCTGGGCGTCCTCCAGGCGCAGGTAGGCAGCGCTGCAATTGGTCTTCGGTTCGAGCGCCTCGAAC AGCGACAGGTGCAGCTCCAGGGCGCCGCGCTGGAGGATGGCGTAGGTCGGATAGCGAGCGCCAAGGTGGAAGCCGAGGGACTGGTAGAAGGCGCTGGCGC TGTCCAGATCGCGGCAGGGGAAGGTCGGGATTGCGCGTTCCATGGCGACGGTTCTCGAAAGGATGAGTTTCGATCTGAGCACGACGAACGGTCGTTCTCA AGGCTCTTGAAATACTTCCGACGATCCCTATCTAGTTCGTGCGGGATGCCGAAGACGGGTTCCGCACCAGAGTACTTGCTGATAATTCAGGAGATTCGCA
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DNA Sequence for Gene |
>M062_16705
ATGAGCAACGCTTTTTCCCTCGCTCCGCTGTTCCGTCATTCCGTAGGCTTCGATCGCTTCAACGATCTGTTCGAGTCGGCCCTGCGTAATGAGGCCGGGA GTACCTACCCGCCCTACAACGTCGAAAAGCACGGTGACGACGAGTATCGCATCGTCATCGCCGCCGCCGGCTTCCAGGAAGAAGACCTGGACCTGCAGGT CGAGCGCGGCGTGCTGACCGTCAGTGGCGGCAAGCGCGAGAAGTCCACGGACAACGTGACCTACCTGCACCAGGGCATCGCCCAGCGCGCCTTCAAGCTG TCGTTCCGCCTCGCCGACCATATCGAGGTCAAGGCGGCTTCGCTGGCCAACGGCCTGCTGAACATCGACCTGGTGCGGCTGGTTCCGGAAGAAGCCAAGC CGAAGCGTATCGCCATCAATGGCCAGCGCCCGGCACTGGACAACCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGTCAGCGGTGATCGAAAAAAGGCGCCTTCGTGCGCCTTTTTTCATTTCGTTGCGCTATCGGCCCGGGGCTCCGCCGGTAGGCCGTCGGGCACTTCGTC CAGCAGGACGTCGAGGTCGACGGCGGCCGCCATCGCCCGGTTGCCTTCGTCGCTGGGGTGCAGATGGTCGCCGGAGGCGTAGCGCGCGGCGAGCCGCGAC GGCTGCTCCGGATCGCGCAATGCCGCGTCGAAGTCGATCACCGCATCGAAGGCGCCGGCATGACGGATCCACTCGTTAACCTGCCTGCGCAGGGCTTCCT TGGCGGGATGGTAATAATCGCTCAACGGCGTGCCGGGCAGTGCGCCCTCGAACGGCGTGAGGGTCGCGCCGACGACCCGGATACCCCGGTTGTGCGCCCG TTCGATCAATTGCCGGTAGCCGGCGATCAGCGCTTCCAGGGTGGGCGGTGCGGCATTCCGGGCGAAAGCGGTACCGGGCCAGGCAATGTCGTTGATGCCG
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Amino Acid Sequence |
>heat shock protein IbpA
MSNAFSLAPLFRHSVGFDRFNDLFESALRNEAGSTYPPYNVEKHGDDEYRIVIAAAGFQEEDLDLQVERGVLTVSGGKREKSTDNVTYLHQGIAQRAFKL SFRLADHIEVKAASLANGLLNIDLVRLVPEEAKPKRIAINGQRPALDNQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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