Pseudomonas aeruginosa RP73, M062_12320

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa RP73, complete genome. [Details]
DNA Sequence Upstream of Gene
TATTTCTTCGCGCCGCGGGTCGAGTTGCAGCGGCTGACCCTGGATGTCGCCGCGCGCGCCAACGACGACTCGCCGATCGCCGTGGATTTCGTCGCGGTGA AGGATGCGGAGCTGTTCAAGGAACTGGCCGGACTGCCGGCCAGCCAGTGGTTCGCCAATCGCGAGCAGTACCGCCGCGACTACCGGCAGCAGTTCGCGGT ATGGAGCCTGGAGCTGGTCCCGGGGCAGTTCATCGAGTCGGAGTCCTTCCCCTTGCGCGGCGACCGCGCAACTGGACTTTTGGTCTTCGCCGGCTATAAC ACACCCGGCGCGCACCGCTTGCGCCTCGACCAGCAGCAGCGCGTCTGGCTGCGTCTGGATACCCGGGAAATGCGACTGGTCAACGATCCCGCCACGCGTT AGCGGAGGGGCAGGCGAGCGACCGTCGTGCACGACAACGTAGGACGTCGAAGGGGAGTCGTATGAGTGTTCTGCCTGACGCGGTGTGCTGGCACGAAGGG
DNA Sequence for Gene
>M062_12320
ATGCAACTGCTTCCCCAGCATTTCCAGTTGCAGGGATTGCGTGCCGAGGCGCTGGCGGCGCGCATCGGACAGGCCTGCAACCCTTGGTTCTGGGGAGTGA CCGCCCTGGAACTGGACCCCTCTGCGTTGTGCGCCGGCCAAGTGCGGGTCCTGCACCTCGAAGCGATCCTGCCCGACGGCCTGCCGGTGAGCGTGCAGGC TGGTGTCGACGCGCCGCTGGAGTTCGACCTGGAGACAGCGCTGGCGGCCGCCGAAGGGCCGCTGCTGAACGTCCACCTGGCGGTCAGTCCGCTGTGGCGG GCGGGTCAGTTGCTGCCGCTGAAGGGCCGTCTGCAATCGCGGGTCGGCGCGCCGCTGCCGGACCTGGCCAGCGGCGAGCACCCCGAGCCGATCACCGTCT GGCGAGCGTCGCTGCGGCTGGTCGGCGACGACGGCAAGGCCGACTCCGTGTGCCTGCCGTTGCTGCGCGTGGCGAAGGAGGGCGGCGCCTACGTCAGCCT GCCCTACGTCCCGCCGACGCCACTGATCCTGCCGGAGTCGCCCCTGGGCAGACGCATGCAGTCGCTCTGCGCGCGGGCCCGGGAGAAGGCGCTGTTCCTC GGCGGGCGCCTGCGCCTGGCGCAGCAGGCGGGCAACCAGGACGACGCGGTGGAAATCCGTCGCCAGCTTGCCGCGCTCTGGACCCGCCTGCCGGAGGTCG AAGGCCTGCTGGCAAGCCGTGCGGCCTCGCCGCTGGCCCTGCACGGCAGCCTGCTGGGCCTGGCCGGTGCCTGGGCGGCGCTCGATCCGCTGGCCGGCGT GCCGGCCTTCGAAGCGCTCGACTTCCTCGACCTGCGGCGTGGCTACGAGCCGCTGCTGGACTGGTTGGAGCGCGCCATCGAGTCGATCCGCGCGGGCTAC CGCTGCCTGCCGTTCGAGCAGGAGGAACAGGTATTTTCCGTGCGCCTGCCCGATCCGGCGCCGCGTCAGCGCCTGGTGGTCGGCCTGCGGATGCCCGCCG GCGCCGGCGAACAGGCGGCGGCTGACTGGCTGGAGCGCGCCATCGTCGCCTCCGACCCGCACCTGCCGTTGCTCGCCCGGCAACGCATGAGCGGGCTGCC GCGGCAGCCGATGAATCGCCAGGAACAGGTGGCCTACAGCGTTGGCGACGACACCCGTTTGTTCGTCGTGCAGGGTGCCGGCGACTGGTTCGATGCCGGC CAGCCGCTGCGCATCGTCGCGCCGGTCAGCGGGGTCGCCAGCAGTCCCTGGCAGATCGTGCTGTTCGTCGCCGACGGCAGCGACAACACCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAGGAAGGAGCCGCCAATGCCCGAAGGGAGTGCAGGGCCTTTTTCCCAGGCGTACCAGGAGCAACCGCTCAGCACGGCATTCCGCCAGGCCTGGCAGGA ATGGCTGGAGGCCTGGGGCGCCCTCGACCGGGACGCCCAGGATGTGCCACGGATGGTCGAGCGCGCCCTCGAACTGTCCACCCGCATCACCCGGCGTCTG TGGCGCAGCGCCTTCGCCAGCGTCGGCGACGCGGCGGGCGTGCAGGTCAAGGCGATGGTCTATGCCTTCGTCGCCCTGGTCGACGAGACCCTGGTCTTCA GCGCCTGGCCGGGGCAGGGCGCCTGGCAGGACAAACCGCTGGAGTCGCATCTCTACGGCAGTCGCCAGGCGGGCGAATACCTGCCGCTGGCGATCAAGCG CCTGCTCGACGAACGCGCCCCGGCCAGTCGCGACCTGGCCAACGTCTACCTGCAATGCCTGATCCTCGGCTTCCGCGGTCGCCTGCGCGGGCCGCGCGGC
Amino Acid Sequence
>type VI secretion protein
MQLLPQHFQLQGLRAEALAARIGQACNPWFWGVTALELDPSALCAGQVRVLHLEAILPDGLPVSVQAGVDAPLEFDLETALAAAEGPLLNVHLAVSPLWR AGQLLPLKGRLQSRVGAPLPDLASGEHPEPITVWRASLRLVGDDGKADSVCLPLLRVAKEGGAYVSLPYVPPTPLILPESPLGRRMQSLCARAREKALFL GGRLRLAQQAGNQDDAVEIRRQLAALWTRLPEVEGLLASRAASPLALHGSLLGLAGAWAALDPLAGVPAFEALDFLDLRRGYEPLLDWLERAIESIRAGY RCLPFEQEEQVFSVRLPDPAPRQRLVVGLRMPAGAGEQAAADWLERAIVASDPHLPLLARQRMSGLPRQPMNRQEQVAYSVGDDTRLFVVQGAGDWFDAG QPLRIVAPVSGVASSPWQIVLFVADGSDNT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site