Pseudomonas aeruginosa RP73, M062_08865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa RP73, complete genome. [Details]
DNA Sequence Upstream of Gene
GCCGGTTTGCTGCGGCAGTGCATCGGCGGCTTGCAGCAGAGCCTGCGGACCCGCAGCGAACTGAAGAACGAACTGCGCCTGTCGCTGAGCACATTGCGCG ATACCGGCAAGAATCCCTTGCGCTTCAGCGCCGATGCCGGCGAGGCGCTGGGTCATCTGCTACGGGATGGCAAGCCTGGCCAGTTGAGTGGCGAACAGGC CGTCGCACGCAGTTTCCGCGACCTCCAGGCGCACCAGGTGGCGCTGCTCGGCGCCAGCCGGGCGGCGGTGCGCGCGACCCTCGAGCATTTCTCGCCGCAG CAGCTGGCCCTGCGTTTCGAGCGCGACGGTCGCCGGCCGTTGCTGGCCACCTCGGGCAGCCGCTGGCGTGCCTATGGTCGCTACCACCAGTCGCTATGCC AGGACGACGATTGGAGCGAGCGTCTGTTGGCGCGTGATTTCGCCCAGGCCTACGAAGAGCAGGTTCGCCTGATTTCCACCCTCTACACCGAGCACCAAGG
DNA Sequence for Gene
>M062_08865
ATGATCGCCATGTCTCGTCGCCCGATCCCGCCAGCCAGGGCGCTGGCCATGCTCGCCGTCCTGGCGCTGCTGGCCGGCTGTTCCACGCTGTCGCCGTATT CCAGACTGACCAAGCTCGACCTCGCCCTGAGCGCCGGCGAGCGGGTCAATCCCGACCTCAATGGCCGGCCGTCGCCGGTGGTAGTGCGGCTGTTCGAGCT GAAACACCCGGTGGCGTTCGAGAACGCCGACTTCTTCAGCCTCTACGAACGTCCCAAGGAGACCCTGGACCCCGACCTGGTGACCAGCGAGGAGCTGGAG CTGCGTCCCGGCGAGCGGGTCGAACTCAAGCTCAGCGTGGGGGAGGGGAGCCGCTACGTGGGCGTGCTCGCCGCCTACCGTGATCTCGGCGAGGCAAGCT GGCGCTACGTGGTGCCGGTCACGGCGAAAGAGCTGACCCGGGTAGAGCTGAAGCTGAGCCAGAAGGGCATCCTGAATGCCGGCGAACTGCTCGGCAAGGC GGGTGACGCGCGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGTGCACAAGATCGTCTGGCAGGAAGGCATGCTGCTGCGCCCGCAGCACCTGCAACACAACGACCGCTACTACGACAACCAGATGAAGGCCCGGACCCA GTTGCTGGGCAGCTACAACTGGGGCTTCCTCGCCCTGGAGCTGGACCGCCAGTTCCTCAACATGGGCAAGCTGGTGATCAGCCAGGCCTCCGGCGTATTG CCCGACGGCAGCCTGTTCGAACTCGGCGGCAATACCGAGCCGCTCGCCCTCGACGTGCCGCCCAATACCTCGAACGTGCCGATCTACCTGGCCCTGCCGC TGGTCACCGGAAACCACATCGAGGCGCGTCGGCCGGAGCAGGCCGAGGTCCTGGCGCGCTATACCGCCTACGACCTGGAGGTGGCGGACTCCAACGCCGG CGAGGATTCCATGGTGCAGGTCAGCTGCGCGCGGCCGGATTTTCGCCTGCTGCTCGGCGAGCAGCAGAGCGACCAGGCCTACGTCAAACTGAAGGTGGCG
Amino Acid Sequence
>type VI secretion protein
MIAMSRRPIPPARALAMLAVLALLAGCSTLSPYSRLTKLDLALSAGERVNPDLNGRPSPVVVRLFELKHPVAFENADFFSLYERPKETLDPDLVTSEELE LRPGERVELKLSVGEGSRYVGVLAAYRDLGEASWRYVVPVTAKELTRVELKLSQKGILNAGELLGKAGDAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site