Pseudomonas aeruginosa RP73, M062_08845

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00004	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00004	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	prp02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	prp03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Coils	Coil	Coil	-	-	517	537	-
SMART	SM01086	ClpB_D2_small_2	IPR019489	Clp ATPase, C-terminal	782	874	1.8E-7
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	787	857	3.0E-10
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	615	633	2.0E-33
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	161	349	4.5E-70
Gene3D	G3DSA:1.10.8.60	-	-	-	785	874	1.9E-9
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	611	772	2.8E-9
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	349	441	7.0E-29
SUPERFAMILY	SSF81923	Double Clp-N motif	IPR036628	Clp, N-terminal domain superfamily	20	127	1.06E-10
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	210	341	7.8E-10
Pfam	PF02861	Clp amino terminal domain, pathogenicity island component	IPR004176	Clp, repeat (R) domain	29	75	3.4E-4
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	722	736	2.0E-33
CDD	cd00009	AAA	-	-	190	341	7.20725E-15
Coils	Coil	Coil	-	-	577	597	-
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	205	350	2.6E-10
Coils	Coil	Coil	-	-	475	495	-
Coils	Coil	Coil	-	-	419	439	-
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	564	780	2.8E-66
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	689	707	2.0E-33
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	493	513	-
NCBIfam	TIGR03345	JCVI: type VI secretion system ATPase TssH	IPR017729	AAA+ ATPase ClpV1	15	865	0.0
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	660	678	2.0E-33
FunFam	G3DSA:3.40.50.300:FF:000010	Chaperone clpB 1, putative	-	-	158	349	3.7E-83
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	350	558	2.5E-46
FunFam	G3DSA:3.40.50.300:FF:000025	ATP-dependent Clp protease subunit	-	-	564	780	6.3E-82
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	560	857	6.19E-58
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	167	544	1.43E-70
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	611	776	5.3E-42
PANTHER	PTHR11638	ATP-DEPENDENT CLP PROTEASE	-	-	26	863	0.0
Gene3D	G3DSA:1.10.1780.10	-	IPR036628	Clp, N-terminal domain superfamily	7	152	1.9E-24
CDD	cd19499	RecA-like_ClpB_Hsp104-like	-	-	578	780	8.66345E-83
Coils	Coil	Coil	-	-	451	471	-

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.