Pseudomonas aeruginosa RP73, M062_03720

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00834
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00834
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50156
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other RP73 genes in this class
Cell wall / LPS / capsule Other RP73 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG prp01503 Cationic antimicrobial peptide (CAMP) resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG prp02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR22939 SERINE PROTEASE FAMILY S1C HTRA-RELATED - - 23 362 8.7E-102
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 168 192 4.5E-53
Pfam PF13180 PDZ domain IPR001478 PDZ domain 386 466 1.4E-9
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 202 219 4.5E-53
FunFam G3DSA:2.30.42.10:FF:000037 Periplasmic serine endoprotease DegP-like - - 268 369 1.5E-34
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 128 148 4.5E-53
CDD cd00987 PDZ_serine_protease - - 270 359 9.87851E-27
Pfam PF13365 Trypsin-like peptidase domain - - 98 231 1.0E-34
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 310 322 4.5E-53
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 385 472 4.86E-15
CDD cd00987 PDZ_serine_protease - - 385 470 9.66653E-18
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 381 474 1.1E-17
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 107 119 4.5E-53
Pfam PF02163 Peptidase family M50 IPR008915 Peptidase M50 239 376 4.8E-11
Gene3D G3DSA:2.40.10.120 - - - 27 263 1.6E-85
Pfam PF13180 PDZ domain IPR001478 PDZ domain 272 359 2.8E-17
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 268 369 3.4E-28
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 224 241 4.5E-53
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 252 358 4.05E-23
NCBIfam TIGR02037 JCVI: Do family serine endopeptidase IPR011782 Peptidase S1C, Do 28 470 0.0
SMART SM00228 pdz_new IPR001478 PDZ domain 384 463 3.7E-11
FunFam G3DSA:2.40.10.120:FF:000007 Periplasmic serine endoprotease DegP-like - - 28 263 2.4E-106
SUPERFAMILY SSF50494 Trypsin-like serine proteases IPR009003 Peptidase S1, PA clan 6 279 2.64E-70
SMART SM00228 pdz_new IPR001478 PDZ domain 270 352 3.9E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.