Pseudomonas aeruginosa RP73, M062_02495
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa RP73, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TATGGCGCCTTTTGTCGGGGAGCCCCGGCACGCCGGGGGTCAGGCTCAAGGGCATCATAAGTGGCTGTATGACGCTGTCAACCCAACCCAGGACACAGGG CTACATCTGGTCAATATTTGATCATCCATGTAGAAGCCAGCAGTCATCGACTGCTCCAATCGGCCTCGTCCTCTATGTGGCATTCGGCTCCCTGGAAGAA ACGGCGCAACTACCTCGGAAAACTACAAGTAATGCTTAGGATATTTCCTACAAGAAATAGGAAATATCTTATTTATATATTCCCTGGCAGATTTCTAACA TGGAGAAACATTGAATCTCTTGCCACCCTAGCGGTGCGCAACGAAAACAAGTTATCCAGACTTGAACCATGAACGCAACCAACCACCCTAAATATAGCCA TTCAAAGCGCAGCGGAAGTATAACGAAAAATATATTCGATCCTTCCGACCAACCACTTTCCAAAACACGATACGGGTTTCATTCGGGCACATTCAGGAAT
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| DNA Sequence for Gene |
>M062_02495
ATGAATGGAAAGCGCCTCTTCCAGGTCCGAAGTTGGCTTCGGATGGTTCTTGCATCGATATTCGCCTGGCTGTGCATGTCCGCCCATGCCGATCTCTCGT TCGACGGCCAGAACCGTTTCGTGATGAAAGGCAAGCGCCTGCCGATCACGCTGGTCAACGAGGGCAAGGAGCCGGCCCTGGCGGAAATCTCCCTGGATTG GGGTACCGACGGCAAGGGGCAGGCGCTGCCCTTCGCCGTGTCCAGGCCGCTGCTCCGCCTGGGCGCCGGCCAGCGGGCCAAGGTGGAGGTGCTCTACCAG GGCCAGGGCCTGCCCACCGAGCGCGAGACCTACCTGCTGTTGAGCGTGCTGGACGTGCCGCACGCGACTGGCAAAGGCGATGCTCTGCAAATCGCTCTGC GCCATCGTTTCAAACTGTTCTACCGACCGTCCTTGAAAGCTACCGTCGAGCAAGCCATGGCTGGCTTAACCTGGTCCTACGATCCTGAGGGTAGTCCCAG GACGCGGAATCCCTCTCCCTATTACGTGACCCTCAGCCAGGTGGAGTTTCTCGATGCGCCCGGGCGGCTCTGCGCCCCACCCATCGATCACCTGATGCTG GCTCCTTATACCGAACACTCATTCGACAGCATCGATTGCCAGGCCATCAAGGCTCGATATGAGGTAGTCAGCGACGCCGGCAACCTACGACCCTTTCAGG TCATATTGCCAACGAATGGGAAAGCTACCGCCAATCCACTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTAGAAGAGTTTCCCTATGAAGTTAACCATCCAACTCCTGTTCCTGGGACTGCTCCTGGCTCTATCCCAAAAAAGTCTCGCTTTGACTTGTCTGAAAAA CGCGACGGACGTATCTGATCAAATCTCGATGGATACGACCGTCGCGGTACCCATTGTGCTTCCCAAGGACACCATTCTCTGGCGTTCCCCCAACTACAGC GTCAATATAAGTTGCTGGGCGAACCAGTTCTGGAACGCCGAAGAGGAGATCTATTTCTACCTCAGCCCCAAGGATCCTGGCTTGAGCATGATCGGACCCG ACCTGGAGGTCGGACTGAACCTCGACGGGAAGGACATACGGTGTACGCAGGTCGATCGCTGCCGAATCAAGCTTCCCTATAAGACCCTGCCCTGCCGGAG CAATGCGCCTGGCGGCTGCCCACATCTGAAAACAAACTTCACGCTGCACTACAACTTCTTCATTTCCAAGCGAAGCCTTCCCGGCACCAGCAAGGAAGGG
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| Amino Acid Sequence |
>pilus assembly protein
MNGKRLFQVRSWLRMVLASIFAWLCMSAHADLSFDGQNRFVMKGKRLPITLVNEGKEPALAEISLDWGTDGKGQALPFAVSRPLLRLGAGQRAKVEVLYQ GQGLPTERETYLLLSVLDVPHATGKGDALQIALRHRFKLFYRPSLKATVEQAMAGLTWSYDPEGSPRTRNPSPYYVTLSQVEFLDAPGRLCAPPIDHLML APYTEHSFDSIDCQAIKARYEVVSDAGNLRPFQVILPTNGKATANPL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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