Pseudomonas aeruginosa RP73, M062_01455
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa RP73, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACGGGCTGACCAACAAGGTCGAGCCGGGCGCGCCGATCGAAGGCAACTCCTACGAGCAGATGGAGCCGAGCCTGCCGAACAACCTGCGCGACGCCCTGCG AGAGCTGGACGAAAGCGAGATCATGGCGAAGTACATCGACCCGAAGTACATCGACATCTTCGTCGCCTGCAAGGAAAGCGAGCTGGAGGAGTTCGAGCAC TCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTCTGAGGTAGCGGTATCGGCGCGCCGGTCCTGGGCCGGCGCCGTACGCAGCGAAATCCGG GGCGGTTTCGCAGACACTCAACGCGGGGGCGTCTGTGTCTGGGAAACCGCCCCGGTCCTTTTCTCGGAACCGGGAAATGTGCGCCACGGCACAGCCTGCC GCCACGCCTCCCGCCAGACTCGATGCTGGCCTGCATCAATGCCTCTGCCGCCTGGCTCCGGCACCATCGTCCGCTCCGTTCCGTCCAGCGAGAAGATTCC
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| DNA Sequence for Gene |
>M062_01455
ATGCCCCGCCTTTCCGCCCTGCTGTTCCTCGCCCTCGCACCCTGGCTGGCCCAGGCCGAGGAGACCCTGCGCGTCTACAACTGGAACGACTACATCGACC CACAGGTGCTCGAGTCCTTCCAGAAGGACACCGGCATCCGCGTCGAGTACCACACCTTCGCCACCGCCGAGGAACTGGACAAGGCGCTGCGCAGTGGCGA GGCGATCGACGTCGCCGTCCCCTCCCACGACACCCTGCCGGCCCTGCTGAAGGACAACCTGCTGCGGCCGCTGGACTTCACCCAGCTGCCCAACCGCAGC CATCTCGACCGTCAATTGCTGAGCAAACTGGCCGCGGTCGATCCTGACAATCGCCACGCCGTCCCCTATCTATGGGGTGCCGTAGGCCTGGCCATCAATA CCCCGCAGGCCGAAGCCGCCTATGGCGGGCCGCTGCCCAACAGCTGGAGCCTGCTGTTCGACGCCAGCCAGAGCCAGCGCCTGAAAAGCTGCGGCATCAG CCTGCTGGACGCGCCGGACGAAACCCTGGCGATCCTCCTCAACTACCAGGGCCGCAACCTCGGTCGTACTGCGCCGAGCCAGGTACGCCGCGCCGCCGAG GCGCTGCACGGACTGCGACCGAACCTGCGCTACGTCGACAGCGAGCGCTACATCGCCGACCTCGAAGGCGGTCGCCTCTGCCTGGCCATGGCCTGGGTCG GCGACGCCCTGCGCGCGGCCAAGGCGGGCCAGCCGGTAAGTTTCGAGGTACCGCAGGAAGGCTCGGTGCTGTTCATCGACAACCTGGTGATCCCGGCCGG CGCCCAGCATCCACGCGAGGCGCACCGTTTCATCGACTACCTGATGCAACCGAAGATCGCCGCACAGATCACCGCCGCCACCCTCTACCCCAGCGGCAAC GCCGACGCCGCCGGCTTCCTCGATCCCGCCCTGCGCCAGCAACCGGGCCTGTATCCGGACCGCGACACCAGCCGCCGCCTGTTCGCCCTGGAAACGCCGC CGGAAAAGCTCCGGCCGGTGGTCGACGAGATCTGGAAGGCCTTCCGCGGCGCCAGCCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGCTTGCTCCGGTCGCGTGAGCTGGCGTCCAATAGCCGCTCACGCCCGGAGACCCGCCATGCAGCCCACCTCGTCCACCCGCAAGCCCCGCGCCAGCA GCCAGGCCCGGATCGCCGCGATCCTCGACGCCGCCCGCGGCCTGCTCGCCGACGAAGGCATCGGCGGCCTGACCATCTATAGCGTGGCCGAACGCGCGGA AATGCCGCCATCGTCGGTCTACCACTTCTTCCCCAGCGTGCCGGCCCTGCTCCAGGGGCTGACCGGCGAGGTCCACGCCGCCTTCCGCGCGTGCCTCGAA CAGCCGGTGGACCATGCAGGCCTGCGCTGCTGGCGCGACCTGTCGCGGATCGTCGAGGAGCGCATGCTGGCGGTCTACGCCCGCGACGCGGCGGCCCGCC AACTGATTCTCGCCAGCCACGGCCTGGCCGAAGTCACCCAGGCCGATCGCCAGCATGACGTGCAACTCGGCCAGGCCATGCGCGCCCTGTTCGAGCGGCA
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| Amino Acid Sequence |
>spermidine/putrescine ABC transporter substrate-binding protein
MPRLSALLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLRPLDFTQLPNRS HLDRQLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAE ALHGLRPNLRYVDSERYIADLEGGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPAGAQHPREAHRFIDYLMQPKIAAQITAATLYPSGN ADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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