Strain | Pseudomonas aeruginosa strain AZPAE14443 AZPAE14443_contig_5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAACTCGCTGGCGCGACTCATGGCGGTGGAGATGGAATCCAGCGCCGGCGACAGGTGGGCGAAGATTTCCTGGGCTCGCGCGGTGGGCTCCATGCTGCG TCCGGTACGGACGAACAGCGGGTCGTCGAACAGCGTGCGCAGGCGCGACAGCGCGGCGCTGATGGCCGGCTGGCCGAGGAACAGTTTCTCTGCGGCGCGG GTCACGCTGCGTTCGTGCATCAGGGTCTCGAACACGATCAGCAGGTTCAGATCGACGCGGCGCAGGTCGTTTCGGTTCATGGCGTTCCTCGTTTCCAGGG GCTAGAGGCTGCAACCGCGGGGGCTCGCCGTCAAGCCTTGCGTGCGAGACGGGGCGGGGCCTGGCGAGGTGCCGGAGGGGCATAGGATCACTGACAGGCA TAGCCATTATCAATAACGACGGGTGGTTTTGTCAGGCATGGGCGGATACAGTCACAACCCATGAGGTTATTCACCCCGTGATGCACTGCAGAGGTTTGCG
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DNA Sequence for Gene |
>NQ69_RS07345
ATGTCCCGAGTGATCCGTTTTCATCAGTTTGGCCCGCCAGAGGTCCTCAAATGCGAAGAGCTGCCGACCCCGGCGCCGGCCGCAGGGGAAGTCCTGGTGC GTGTCCAGGCGATCGGCGTGAGCTGGAAGGATGTGCTCTGGCGTCAGAACCTGGCCCCGGAGCAGGCTGCGCTGCCGTCCGGTCTCGGCTTCGAACTGGC CGGCGAGGTGCTGGCGGTCGGCGCCGGCGTCGGCGACCTGCCGCTGGGTTCCCGCGTGGCCAGTTTCCCCGCCCATACCCCCGCGGCCTATGGCGACGTG GTGCTGATGCCACGCGCGGCCCTGGCGGTCTACCCCGAGGTACTCACCCCGGTGGAGGCCAGCGTCTACTACACCGGCCTGCTGGTGGCCTATTTCGGCC TGGTCGACCTGGCCGGGTTGAAGGCCGGGCAGACCGTGCTGATCACCGAGGCGGCGCGCATGTACGGACCGGTCTCGATCCAGTTGGCCAAGGCTCTCGG CGCGCGGGTGATCGCTTCCACCAAGTCCGCCGAGGAGCGCGAGTTCCTCCGCGAGCAGGGCGCCGACAAGGTGGTGGTGACCGACGAGCAGGACCTGGTC CTGGAAGTCGAGCGCTTCACCGAGGGCAAGGGCGTCAATGTCATCCTCGACGAATTGGGCGGCCCGCAGATGACCCTGCTCGGCGATGTCTCCGCCACCC GCGGCAAGCTGGTGCTGTATGGCTGCAACGGCGGCAACGAGTCGGCGTTCCCGGCCTGCGCCGCGTTCAAGAAGCACCTGCAGTTCTACCGCCACTGCCT GATGGATTTCACCGGTCATCCGGAGATGGGCCTGGAACGCAACGACGAGTCGGTGAGCAAGGCCCTCGCGCACATCGAGCAACTGACCCGCGATCGCCTG CTCAAACCGGTGGTCGACCGGGTATTCGAGTTCGACCAGGTGGTCGAGGCGCATCGCTACATGGAAACCTGTCCGAAGCGTGGCCGGGTGGTGATCCACG TCGCCGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGACGACCCGCAGCGAAAGAGCCCGGCCAGCGAGCCGGGCTTTTTCGTGGGCGCGGTTTCAGATCCACAGATCGTTGACGGCCGTCCGCTCGCCGCCCTG GTCGCCGGTGTTGCGCACGCCGCAGGGCTCCACCAGGAGCATGCGCACCTCGCCCTCGGCGAACGGCTTGTGCTCCACGCCGCGCGGCACCACATACATC TCGCCGGGGCCCAGGTGCACCGCGCCGTCGCGGAAATCGATGCGCAGGCGACCGGCGAGGACGATGAAGGTCTCGTCGGTGTCGGCGTGGCTGTGCCAGA CGAAGTCGCCTTCGATCTTCACCAGCTTGAACTGGTAGTCGTTCATCTGGGCGATCACCCTGGGTTGCCAGCGGTCGTCGAACAGGGCGAGCTTGGCGGC GAAGTTGATCGCTTGGGTTGTGCTGGTGGACATCGGTGCGCTCCGGTGGTTGGTCTCTGGCGCCAGGGTAGGCGGCTACGGAGCGGGCGGTCTTGGATGA
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Amino Acid Sequence |
>alcohol dehydrogenase
MSRVIRFHQFGPPEVLKCEELPTPAPAAGEVLVRVQAIGVSWKDVLWRQNLAPEQAALPSGLGFELAGEVLAVGAGVGDLPLGSRVASFPAHTPAAYGDV VLMPRAALAVYPEVLTPVEASVYYTGLLVAYFGLVDLAGLKAGQTVLITEAARMYGPVSIQLAKALGARVIASTKSAEEREFLREQGADKVVVTDEQDLV LEVERFTEGKGVNVILDELGGPQMTLLGDVSATRGKLVLYGCNGGNESAFPACAAFKKHLQFYRHCLMDFTGHPEMGLERNDESVSKALAHIEQLTRDRL LKPVVDRVFEFDQVVEAHRYMETCPKRGRVVIHVAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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