Pseudomonas aeruginosa AZPAE14443, NQ69_RS15430

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14443 AZPAE14443_contig_10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGACTGGCGCTCCCCGGTCGCAGGGTGAGTTGACAGGCACACCGGTCGTACACCTGTACGGCCGGTTCTCCGTCGAGCCGAAAATGTCCGCTACTTCGCG AAATAGACACCGAGCCAAGACTTTCGGCAGCGGCTGAGCAAGAGTAACGTGGGGCTCGCTTCTCCAACGGAGGGGGGAGGAACCGCCCGCCAGGAACAAG GAACGATCC
DNA Sequence for Gene
>NQ69_RS15430
ATGCGTCAAAGGGACCTGAAATTCACCTTCGTCGTCGGCGAAGGGAAACTCGCGTTCGATGTCGTCGAGTTCGAACTGGAAGAAGCGCTCTGCGAGCCTT TCCGCCTGAACCTGAAGCTGGCCAGCGACAAGAACGCCATCGATTTCAGGCAGGTACTCGACCAGCCGGGCACCTTCACCCTCTGGCAGGACGGCCGTCC GGCCCGCTACGTCCATGGCATCGTCAGCCACTTCACCCAGGGCAGCTCGGGTTTTCGCCGGACCCGCTACGAACTGCTGCTGGAACCGCAGTTGGCGCGC CTGGAGCTGTGCTGCAACTGGCGGATCTTCCAGGAGAAGAGTGTTCCGGAGATTCTCCAGGCGCTGCTCAAGGAGCACCGGGTGCTCGACTACGAACAGC GTATCTACCACGAGCACCTGCCACGCGAATACTGCGTGCAGGCCGGCGACAGCGATCACTACCTGCACGACCGGCTGGCCTTCGAGGAAGGCCTGGTCTA CTACTTCCGCTTCGACGAACACCGCCACACCCTGGTCTGCAGCGACCGGCTCTACGTCCAGGAGCGTATCGCCGGCGGCCCGGTACTGTTCAGCGCCCAG CCGGAGGGCGACAACCCGCAGCCGGTGCTTCATTCTTTCCGCTACAGCGAAAATGTTCGTACGGCTCGACAGACCCAGCGGGACTACAGCTTCAAGCGCC CGACCTACGACCAGGAGCATCATCTCGCTGGCGAGGCGCTCGAGCATCAGGACTCGTCCTACGAGCGCTACGACTACCCCGGTCGCTACAAGCGGAGCGG CGCGGGCCGGCCTTTCAGCGAAAGCCGCCTCAGAGGACATCGGCGCGATGCACGGGTGGCATCGGTCAGCGGCGACGACCCGCGGCTGATCCCGGGCCAC GCCTTTGCCCTGGAAGGTCATCCGCGTGCCGACTTCAACGCCTGGTGGCGGCCGGTGCGGGTGGTCCATCGCGGCACCCAGTATGCCGGCCAAGAGGAAG AGTCCGCCGACGCCCCTCTGGGGGTGAGCTACGACCTGCGCGCCGAACTGGTACCCGAGGACGTCGAATGGCGTCCCGCACCGCTGCCTCGGCCGCGTAT CGATGGTCCGCAGATCGCGACGGTAGTCGGCCCGGCAGGGGAAGAGATCCATTGCGACGAGTGGGGACGGGTGAAAGTCCAGTTCCCCTGGGATCGCGAG GGACGTCACGATGAATTCAGTACCTGCTGGATACGGGTCGCGCAGAACTGGGCAGGTGCCGACTGGGGGCACATGGCGATCCCGCGGATTGGCCAGGAGG TGATCGTCGATTACCTGGACGGCGACTGCGACCAGCCGATCGTCACCGGGCGCACCTACCGGGCGACCAACCGACCGCCCTACGCGCTGCCCGACCACAA GATCCTCAGCACCATCAAGAGCAAGGAGTACAAGGGCAGCCGGGCCAACGAGCTGCGCATCGACGACACCACGGCGCAGATCAGTGCGGCGCTGATGAGC GACCACGGTGCCAGCGCGCTGCACCTGGGCTACCTGACCCATCCTCGGCCCGAAGGCGGCAAGCCGCGCGGCGAGGGCTTCGAACTGCGCACCGACGAAC ATGGCGCGGTGCGTGCGGCCAAGGGGCTGCTGCTGAGCACCGAGGAGCAGCTCAGGGCCGGCGCCGGCCATCTCGACCGAGGCGTCGTGGTGCAGGTGCT GGAGGCGGCGCTGAAGCTGGCCCGCGAGCTGGGCGACTACGCCGGGGAGCACCAGGGCGTGGGGCACGACGCGGCGCCGCAGCAAACCCTCCAGGAAGCC GTGCGCGACCTCGGCCACGGCGCCAACGACGAGTCCGGCAAGAGCAACGGAGGCAAGCCGGCGATCGCCTTGAGCGGTCCGGCAGGGATCGCCGCGGCGA CGCCGGCGAGCCTGACCCTGGCCGCCGGCGAGCACGTCGACAGCGTGGCCCGGCAGAACCAGCAGGTGACCGCCGGGCAGAAGGTGGTGATCAACGCCGG CAGCGACATCGGCCTGTTCGCCCAGGGCGGCGAGCTGCGCCAGATCACCCACCAGGGCCCGATGCTGCTGCAGGCGCAGAAGAACGACATCCGCCTGGAA GCCGAGCAGAGCGTGGAGGTCAGCGCCAGCCAGCAGCACGTGCTGGTCACCGCGAAGGAGCACATCACCCTGATGTGCGGCGGCGCCTACCTGACCCTCA AGGGCGGCAACATCGAGCTGGGCATGCCCGGCAACTTCGTGGTCAAGGCGGCGAAGCACAGTCATGTCGGCGCGGCCAGCCTGGAAGCCGAGCTGCCGCA GTTCGAGGTGGGCGAGACGCAGCGGCGGTTCGTCCTCAAGCAACTGGACGGGCAGACGGCCATGCCCAACGTGCCCTATACCATCACCATGGCCAACGGC GAGGTCATCGAGGGCGTCACCGACGCCGAAGGCGCTACCCAGCTGCTGCAGAAGGATGCGATGAACATCGCCAAGGTCGATATGAAACACACGAAATCGC CCGCCTCCGCAGTTGCCGGGATAGCAGCGGCGGTTGGCGCGGCGGTTGCAGTCGGCAAGCTCCTGAGTGGCCCCGACGCCGAGGCCGGACGTGCTCTCAG CGAAGGGGAAATCAGCCTGGCGAAAGGCGTATTCGGCGATTCCATCGACTATTCCACGGTCCGCCTGCGCGACGAGGACTATGTCCCCTGGCAGGGCAAG GACTACGTGATGGCGCCGAACGGCCACATCTACTTCGGCGAGGAGTTGCGCGGCGTGGCGGACTGGAGCCTGGAGAGCCTGCAGCGCCAGGGTCTGTTCA TTCACGAAATGACCCATGTCTGGCAGCACCAGCATGGCGTCAACGTCCTTCTGGTGGGGGCCTACCAGCAAGCCAGGCAGTTTCTCCTAGGCGACCAGTA CGCCTACCGGTTGGAGCCGGGAAAGACGTTGAAGGACTACAACATCGAACAGCAGGGAGACATCGTTCGAGATTATTTCCTCGAGAAGAACGAGTTCGGG GAAGCCTCTGCGAACAGCAGGTTCGCTGGCGTACTGAAAAACTTCCCAACGGGATACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAATGAAATGCAAGACCTTGCTCATTGCCTGCCTGTTCGGCCTGGGAAGCGCCCAGGCCCTGGCCGTTTCCAAACTGCCACCGCAGATCCCGGTACACG CCGGCTCCGGGCGCGTGACACTGGATCTACGCCCCTTGCTGGCGGAAACCAACGACGTCGAGATCACCCGTGTTTCGGTATGTCGGCGGGTCGGCAGCCA TTGCCAGGAAACGCTGTGGCGGATCGAGCTCCCGCCCGGGTGGCGTGCCGGGGAGATCGAGGTCTTCGGCGACTATCCCGGCTCCAGCGTGCTCCTGCGC CGGCCGGAGCGCTTGCAGCCAGATGGGAGCTACAACGCATTCATTCATTTCAACGAGCGTAGCCGTCGGCACCAGCAAACGGTTTCCAGCATTGCCGTCG AATTCTGCCTGGCCGGCGAACCTGGCAACTGGATGCTGCTCGACGAAGCGACCTGCCTGGCACGACGCAACGCCGAGGAGCGGCAAGGAGAGAAGCCATG
Amino Acid Sequence
>type IV secretion protein Rhs
MRQRDLKFTFVVGEGKLAFDVVEFELEEALCEPFRLNLKLASDKNAIDFRQVLDQPGTFTLWQDGRPARYVHGIVSHFTQGSSGFRRTRYELLLEPQLAR LELCCNWRIFQEKSVPEILQALLKEHRVLDYEQRIYHEHLPREYCVQAGDSDHYLHDRLAFEEGLVYYFRFDEHRHTLVCSDRLYVQERIAGGPVLFSAQ PEGDNPQPVLHSFRYSENVRTARQTQRDYSFKRPTYDQEHHLAGEALEHQDSSYERYDYPGRYKRSGAGRPFSESRLRGHRRDARVASVSGDDPRLIPGH AFALEGHPRADFNAWWRPVRVVHRGTQYAGQEEESADAPLGVSYDLRAELVPEDVEWRPAPLPRPRIDGPQIATVVGPAGEEIHCDEWGRVKVQFPWDRE GRHDEFSTCWIRVAQNWAGADWGHMAIPRIGQEVIVDYLDGDCDQPIVTGRTYRATNRPPYALPDHKILSTIKSKEYKGSRANELRIDDTTAQISAALMS DHGASALHLGYLTHPRPEGGKPRGEGFELRTDEHGAVRAAKGLLLSTEEQLRAGAGHLDRGVVVQVLEAALKLARELGDYAGEHQGVGHDAAPQQTLQEA VRDLGHGANDESGKSNGGKPAIALSGPAGIAAATPASLTLAAGEHVDSVARQNQQVTAGQKVVINAGSDIGLFAQGGELRQITHQGPMLLQAQKNDIRLE AEQSVEVSASQQHVLVTAKEHITLMCGGAYLTLKGGNIELGMPGNFVVKAAKHSHVGAASLEAELPQFEVGETQRRFVLKQLDGQTAMPNVPYTITMANG EVIEGVTDAEGATQLLQKDAMNIAKVDMKHTKSPASAVAGIAAAVGAAVAVGKLLSGPDAEAGRALSEGEISLAKGVFGDSIDYSTVRLRDEDYVPWQGK DYVMAPNGHIYFGEELRGVADWSLESLQRQGLFIHEMTHVWQHQHGVNVLLVGAYQQARQFLLGDQYAYRLEPGKTLKDYNIEQQGDIVRDYFLEKNEFG EASANSRFAGVLKNFPTGY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site