Strain | Pseudomonas aeruginosa strain AZPAE14453 AZPAE14453_contig_9, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTTTCCTAATGAGAGATCAGCAGGATTCGTTTTCCTTATAAACCGCCCGCGGCCACACTCGCCAGCACTTTTCCGATCCACCCGACGCGGACCGACCATG GCTGGCGAAACCTCGCTGCGCACCCTGCTGCGCACGCTCACTCCCGAACTCAATCCCGGCGACTATGTGTTCTGTACCTGCGCCGCTGGCGCGCTGCCGA ACGGCGCCGAGCCGCTCGCCAGCTTCCGCGAGCGCGAGGGCCTGACCCTGGTGCTCGAACGCCGGCAGGCCGAACGCCTGGGCCTGCCCTACGAATACGT GGCGGCCTGGATCACCCTGACGGTGCACTCCTCGTTGGCGGCGGTGGGCCTGACCGCCGCCTTCGCCACGGCGCTGGCCGAAGCCGGGATCAGTTGCAAC GTGATGGCCGGCTATTTCCACGACCACCTGTTCGTCGCCCGCGACGAGGGCCGGCGCGCCCTCGCCGTGCTCCAGCGGCTGGCGGCGGAGGCACACTGAC
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DNA Sequence for Gene |
>NQ70_RS11580
ATGTGGCAGAGCTATCTCAACGGCATCCTGGTGGCTGCCGGCCTGATCATCGCCATCGGCGCGCAGAATGCCTTCGTCCTCGCGCAGAGCCTGCGCCGCG AGCATCACCTCTCGGTAGCCGCGCTCTGCGTGTTCTGCGACGCGGTGCTGGTCAGCCTCGGCGTGTTCGGCCTGGCCAAGCTGCTGCTGGAAAACCCGAC GCTGCTGGCCATCGCCCGCTGGGGCGGGATCGCCTTCCTGACCTGGTACGGGCTCAAGGCGCTGCTTCGCGCGTTGCGCCCGGACGCCCTCGGCAACGCC GCGGAAACCGGGCCACGCTCGCGCAAGGCGGTGCTTCTGGCGGCACTGGCGGTCACCCTGCTCAACCCCCACGTCTATCTCGATACCGTACTTCTGATCG GTTCGCTCGGCGCCCAGCAGGCCGCGCCGGGCGCCTATGCCCTCGGCGCGGCCAGCGCCTCGCTGATGTGGTTCTTCGCCCTCGCCCTCGGCGCGGCGTG GCTGGCCCCCTGGCTGGCGCGCCCGGCCACCTGGCGCCTGCTCGACCTGATGGTGGCGGCCATGATGCTGGGCATGGCCGCGCAACTGCTGTTCCGGGGA TAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCGGTTTCTGTCTTCCCGAGCGAACCCTCGCGCCGCCAGGCAGTCCAGAGAGAATGTGGCGGTGTTCGCCGGCGAGCTTGCAGAAGCCCGTCGCAGCGC GCCGCCGCCGGCCTTTGCCCCTACAGTTGCTGCGTGGATATGCCCCGACACGGGTGCTATGATCCGGAGTTCGCGGCACTGGGAGCCTAGGCTCCAAGTC GCACCCGGCGCCCTTTCCGGAGCGCTCCGCCGAACGTCCCCCCGGGGATCCAGGACGGGCTCCCGGACAGGCATCGGACCGGCCCCGTGAACCGGTCGCG CGCTAGCCGCGCCAGTCCTGACCTGAGGAAGAATAGGAGAGACACCATGGCTTTCGAATTGCCGCCGCTGCCTTACGAAAAGAACGCCCTTGAGCCGCAC ATTTCCGCAGAAACCCTGGAATACCACCACGACAAGCACCACAACACCTACGTGGTGAACCTGAACAACCTGATCCCGGGTACCGAGTTCGAAGGCAAGA
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Amino Acid Sequence |
>amino acid transporter LysE
MWQSYLNGILVAAGLIIAIGAQNAFVLAQSLRREHHLSVAALCVFCDAVLVSLGVFGLAKLLLENPTLLAIARWGGIAFLTWYGLKALLRALRPDALGNA AETGPRSRKAVLLAALAVTLLNPHVYLDTVLLIGSLGAQQAAPGAYALGAASASLMWFFALALGAAWLAPWLARPATWRLLDLMVAAMMLGMAAQLLFRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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