Strain | Pseudomonas aeruginosa strain AZPAE14453 AZPAE14453_contig_7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCCGCAACAACGGCGTCGACGTCAACGACCTGAAGCGCTGGAACGGCCTGGACAAGCACGCCCTGAAGGTCGGCCAGACCCTCAAGCTGCAAGGCGGC ACCCAGGCCCTGGCGGCCCGCAAGGGAAACGCCGCCGGCAAGCGCGACAGCGCCACCTACTACAAGGTCAAGCAAGGCGACTCGATGTACCTGATCGCCA AGCGCTTCAATGTCGAAATGAAGCACCTGCAGCGCTGGAACCCGCGCAGCAAGCAGGCGCTCAAGCCCGGCCAGACCCTGACCCTGTACCTGGACACCGC GAGCCGCTGACAGCCCATTGCAGGCCGTCCCGAAACGCCACGCCCGCTCCTGCCGGCGTGGCGTTTTCGCAAGCGCGGCCAGAACCCCGGACCCTAGGCC GGACAGGCCCGCGCTCCCTCTTTTTTCCTGTGCGGGCAAGGTGTTACTGTTGCCTGACGATTCGTTGTCAAAAATAGCCAAGGACCCGGACACACGCCTG
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DNA Sequence for Gene |
>NQ70_RS09395
ATGCGTCGCCTCTCCTTCCTGATCCTCGGCCTGGCCGTGAGCCTGCCCAGCTTCGCCGCGATTACCCAGAGCCATGGTTATGCCCAATTCGGCACGCTCA AGTATCCGGCCAATTTCCAGCACTTCGACTGGACCAATCCCGACGCCCCCAAAGGCGGCACCTTGCGCCTGATGGCCTCGGGCAGCTTCGACACGCTCAA CCCCTACACCCTGAAAGGCACCAGCCCGATCGGCACCGGCGATTTCCTCCAGTACGGAGTCAACGAGCTGAACGAACCATTGATGGTGGGCACCGGCCTG TACGACCCGTCCGGCGACGAACCAGCCTCCAGCTATGGCCTGATCGCGAAGAGCGTGGAATACGCGGAAAACCGCAGCTGGGTGGTATTCAACCTGCGGC CGGAAGCGCGCTTCCACGACGGCAGGCCGATCACCGCCAGCGACGTGGCCTTTTCCTATCGCACCCTGGTCAAGCAGGGGCACCCGATGTACCGCACCTA CCTGCAGGAGGTGAAGCGGGTCGATATCCTCACCCCCCACCGGGTGCGCTTCGTCCTGCGGCGCTCCGGCAACCCGCTGCTGATCCTGCGCCTGGGCGAG CTTCCGGTGCTGCCGCAGCATTACTGGAAGGATCGCGACTTCCGCGCCACCACCTTCACCGCGCCGCTGGGCAGCGGTCCCTATCGCATCGTCGAGGTCG ATCCCGGGCGCCGCCTGGTGTTCGAACGCGTGAAGGGCTGGTGGGGCGAAAAACTGCCGGTGAACCGCGGCAAATACAATTTCGACCGGGTCGTGGTGGA CTTCTACCGGGACAACGGCGTCGCCTTCGAAGCCTTCAAGGCCGGCGAGTTCGACTTCTACATCGAGCACCAGGCGAAGAACTGGCTGAACAACTATCGC TTCCCCGCGGTTCTGCGCGGCGATGTGATCCGCACGGAAATCCCGCACCAGATCCCCAGCCAGACCCAGGCGTTGTTCATGAACACCCGTCGCGCCGTGT TCAAGGAGCGCGCGCTACGCCAGGCGCTGGGCGAGATGTTCGACTTCGAATGGACCAATCGCGCCCTCTTCAGCAATTCCTACCTGCGCTCGCGCAGCTA CTACCCGAACAGCGAATTCGCCGCCAGCGGCGTCCCGGAGGGCCAGGAATGGCTGTACCTGTCGCCGTACCGCAAGCAATTGCCGGCGCAGTTGTTCAAA CAGCCGTTCAGCCTGCCGACCACCGAGGGGCGCGGCATTCCCCGTGAAACCCTCAGGCATGCACTCGGTCTACTGGCCGATGCCGGCTGGAAGCTGTCCG GCGACCGACTGCTGAATAAAAAGGGCGAACCGCTGCGCTTCGAAATCCTGCTGGTCAATCCGAGCCTGGAGCGTATTCTCCAGCCCTATCGCGAAAACCT CGCCAGCATCGGCATCGACGCGCGCCTGCGCACCGTCGACCGCGCCCAATACAAGCAGCGCCTGGACCAGTTCGACTACGACATGATCCTCATGACCCTG CCGCAGACCCTCAGTCCCGGCCTGGAACAGTGGCAGTACTTCCACTCCAGCCAGGTGAAGGTCAAGGGCAGCAAGAATTACGCGGGCATCGCCAACCCGG TGGTCGACGCCATGCTCAACCGCCTGCTCGGCGCCCACAGCCGCGACGAACAGGTCGCCGCCGCGCGCGCCCTGGACCGGACCTTGCTCTGGCAGTACTA CAGCATTCCCAACTGGTACCTCAATTCGCACCGTCTGGCGTACCGCAACCGCTTCGCCTTCGTCGCCACCCCGCCCTACACCCTGGGCCTGCGCGCGTGG TGGCAGAAAAACCTGGAGACGTCCCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCGCCCCCGCTTCACCCCTCTGCTGGCAGCCCTGCTGCTCGGCTGCTGCGGCCCGCTCCTCGCTGCCCCGAAACATGCACTGACGCTCTACGATGAGCC TCCGAAGTATCCCGCCGATTTCAAGCATTTCGACTACGTGAATCCGGATGCGCCAAAAGGCGGCATCCTCCGCCAGGCCGACTTCGGCGGCTTCGACAGC CTCAACCCGTTCATCGGCAAGGGCGTCTCGGCCCCTTCGCTGGGCCTGATCTACGACACCCTGGCCTTCCAGTCGCAGGACGAGCCGTTCACCGAATACG GCCTGCTCGCGGAGAAGATCGAGAAGGCACCGGACAACAGCTACGTGCGCTTCTACCTGCGCCCCCAGGCCCGTTTCAGCGATGGCACGCCGGTCACCGC CGAAGACGTGGTGTTCACCTTCGAGACGCTGGTGAGCAAGGGCGACCCGATGTACCGCAACTACTATGCGGACGTCGACAAGGTGGTCGCCGAGGACAAG
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Amino Acid Sequence |
>hypothetical protein
MRRLSFLILGLAVSLPSFAAITQSHGYAQFGTLKYPANFQHFDWTNPDAPKGGTLRLMASGSFDTLNPYTLKGTSPIGTGDFLQYGVNELNEPLMVGTGL YDPSGDEPASSYGLIAKSVEYAENRSWVVFNLRPEARFHDGRPITASDVAFSYRTLVKQGHPMYRTYLQEVKRVDILTPHRVRFVLRRSGNPLLILRLGE LPVLPQHYWKDRDFRATTFTAPLGSGPYRIVEVDPGRRLVFERVKGWWGEKLPVNRGKYNFDRVVVDFYRDNGVAFEAFKAGEFDFYIEHQAKNWLNNYR FPAVLRGDVIRTEIPHQIPSQTQALFMNTRRAVFKERALRQALGEMFDFEWTNRALFSNSYLRSRSYYPNSEFAASGVPEGQEWLYLSPYRKQLPAQLFK QPFSLPTTEGRGIPRETLRHALGLLADAGWKLSGDRLLNKKGEPLRFEILLVNPSLERILQPYRENLASIGIDARLRTVDRAQYKQRLDQFDYDMILMTL PQTLSPGLEQWQYFHSSQVKVKGSKNYAGIANPVVDAMLNRLLGAHSRDEQVAAARALDRTLLWQYYSIPNWYLNSHRLAYRNRFAFVATPPYTLGLRAW WQKNLETSR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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